Job Description P03023 Confidence 99.87% Date Thu Jan 5 10:57:56 GMT 2012 Rank 64 Aligned Residues 255 % Identity 16% Template c3h75A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:periplasmic sugar-binding domain protein; PDBTitle: crystal structure of a periplasmic sugar-binding protein from the2 pseudomonas fluorescens Resolution 1.60 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		S	L	L	I	G	V	A	T	S	S	L	A	L	H	A	P	S	Q	I	V	A	A	I	K	S	R	A	D	Q	L	G	A	S	V	V	V	S	M	V	E	R	S	G	V	E	A	C	K	A	A	V	H	N	L	L	A	Q	R	V	S	G	L	I	I	.	.	N	Y	P	L	D	D	Q	D	A	I	A	V	E	A
Query Conservation																																																																		.	.
Alig confidence																																										.																								.	.
Template Conservation																																										.
Template Sequence		T	S	V	V	F	L	N	P	G	N	S	T	E	T	F	W	V	S	Y	S	Q	F	X	Q	A	A	A	R	D	L	G	L	D	L	R	I	L	Y	A	E	.	R	D	P	Q	N	T	L	Q	Q	A	R	E	L	F	Q	G	R	D	K	P	D	Y	L	X	L	V	N	E	Q	Y	V	A	P	Q	I	L	R	L	S
Template Known Secondary structure										S		T	T																			T									T	.	T															S	S	S			S								S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																										.	.	.	.	.	.	.
Query SS confidence																			.	.	.																										.	.	.	.	.	.	.
Query Sequence		A	C	T	N	V	P	A	L	F	L	D	V	S	D	Q	T	P	.	.	.	I	N	S	I	I	F	S	H	E	D	G	T	R	L	G	V	E	H	L	V	A	L	G	H	Q	.	.	.	.	.	.	.	Q	I	A	L	L	A	G	P	L	S	S	V	S	A	R	L	R	L	A	G	W	H	K	Y	L	T	R	N
Query Conservation																			.	.	.																										.	.	.	.	.	.	.
Alig confidence																			.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	S	G	I	K	L	F	I	V	N	S	P	L	T	L	D	Q	R	W	I	G	S	X	V	G	D	D	E	E	A	G	Y	R	X	L	K	E	L	L	H	K	L	G	P	V	P	A	G	H	G	I	E	L	L	A	F	S	G	L	K	V	T	P	A	A	Q	L	R	E	R	G	L	R	R	A	L	A	E	H
Template Known Secondary structure		T	T	S									S				T	T	T																														S	S										S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
			209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.
Predicted Secondary structure		.																																																																								.	.
Query SS confidence		.																																																																								.	.
Query Sequence		.	Q	I	Q	P	I	A	E	R	E	G	D	W	S	A	M	S	G	F	Q	Q	T	M	Q	M	L	N	E	G	I	V	P	T	A	M	L	V	A	N	D	Q	M	A	L	G	A	M	R	A	I	T	E	S	G	L	R	V	G	A	D	I	S	V	V	G	Y	D	D	T	E	D	S	.	.	S	C	Y	I	P	P
Query Conservation		.																																																																								.	.
Alig confidence		.																																																																								.	.
Template Conservation
Template Sequence		P	Q	V	H	L	R	Q	L	V	Y	G	E	W	N	R	E	R	A	Y	R	Q	A	Q	Q	L	L	K	R	Y	P	K	T	Q	L	V	W	S	A	N	D	E	X	A	L	G	A	X	Q	A	A	R	E	L	G	R	K	P	G	T	D	L	L	F	S	G	V	N	S	S	P	E	A	L	Q	A	L	I	D	G	K
Template Known Secondary structure		T	T										T	T																	T	T							S	S														T	T			B	T	T	T	B						S												T	S
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	I	K	Q	D	F	R	L	L	G	Q	T	S	V	D	R	L	L	Q	L	S	Q	G	Q	A	V	K	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	V	L	E	A	G	H	F	T	L	G	G	W	A	L	V	A	L	H	D	D	A	L	G	L	D	A	R	R	L
Template Known Secondary structure		S							G	G	G														T	T			S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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