Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACS7
Confidence94.20%DateThu Jan 5 11:18:55 GMT 2012
Rank137Aligned Residues53
% Identity19%Templated1ku9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.. .......30.........40.........50.........60.........70.
Predicted Secondary structure  ..








Query SS confidence 






. .
















































Query Sequence  LAPYLRM. . KQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLL
Query Conservation 
   
  ..    

  
  

 


 
   
   

  

    

 


 

 


Alig confidence 






..




















...
























Template Conservation    
         

      

  
     ...  
  


  
 



 

  
  
Template Sequence  IIELFSELAKIHGLNKSVGAVYAILYLSDK. . . PLTISDIXEELKISKGNVSXSLKKL
Template Known Secondary structure  TT


SS...
T

Template Predicted Secondary structure 






...







Template SS confidence 

























































   11........20.........30.........40 .........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions