 |
Job Description | P0ACS7 | Confidence | 93.87% | Date | Thu Jan 5 11:18:55 GMT 2012 |
Rank | 147 | Aligned Residues | 52 |
% Identity | 12% | Template | c3mklB_ |
PDB info |
PDB header:transcription regulator | Chain: B: PDB Molecule:hth-type transcriptional regulator gadx; |
PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12
|
Resolution | 2.15 Å |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | R | I | V | E | W | L | L | K | P | G | N | L | S | C | A | P | A | I | K | D | V | A | E | A | L | A | V | S | E | A | M | I | V | K | V | S | K | L | L | G | F | S | G | F | R | N | L | R | S | A | L | E | D | Y |
Query Conservation |   |
  |   |
|
|   |
|
|
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |
|   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |
| . |   |
|   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | R | V | C | T | V | I | N | N | N | I | A | H | E | . |
. |
W | T | L | A | R | I | A | S | E | L | L | X | S | P | S | L | L | K | K | K | L | R | E | E | E | . |
T | S | Y | S | Q | L | L | T | E | C | R | X | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | T | T | S |
| . | . |
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|