 |
Job Description | P0ACS7 | Confidence | 75.16% | Date | Thu Jan 5 11:18:55 GMT 2012 |
Rank | 361 | Aligned Residues | 80 |
% Identity | 14% | Template | c3dahB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; |
PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei
|
Resolution | 2.30 Å |
|
 |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
. | . | . | . | . | |
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
| . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | R | D | L | Y | G | A | G | G | S | N | A | I | C | A | D | V | Q | H | K | F | . |
L | R | I | G | V | . |
R | C | Q | A | Y | P | D | A | H | I | M | M | M | S | A | S | L | L | Q | E | G | D | V | V | L | V | V | T | H | S | G | . |
. |
. |
. |
R | T | S | D | V | K | A | A | V | E | L | A | K | K | N | G |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |
| . |   |   |   |
|   | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |
|   |   |   |
|
|
|   |   |
|   |
|
|
|
|   |   |   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |
|
|
|   |   |
|
Template Sequence |   |
D | G | L | M | V | F | T | G | N | A | N | P | A | L | A | Q | E | V | V | K | I | L | G | I | P | L | G | K | A | M | V | S | R | F | S | D | G | E | I | Q | V | E | I | Q | E | N | V | R | G | K | D | V | F | V | L | Q | S | T | C | A | P | T | N | D | N | L | M | E | L | M | I | M | V | D | A | L | K | R | A | S |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |
| S |
|
| B | T |
|  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
216 | . | . | . | 220 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
A | K | I | I | C | I |
Query Conservation |   |
  |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
Template Sequence |   |
A | G | R | I | T | A |
Template Known Secondary structure |   |
B | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|