Job Description P0ACS7 Confidence 81.06% Date Thu Jan 5 11:18:55 GMT 2012 Rank 310 Aligned Residues 181 % Identity 10% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	E	W	L	L	K	P	G	N	L	S	C	A	P	A	I	K	D	V	A	E	A	L	A	V	S	E	A	M	I	V	K	V	S	K	L	L	G	F	S	G	F	R	N	L	R	S	A	L	E	D	Y	F	S	Q	S	E	Q	V	L	P	S	E	L	A	F	D	E	A	P	Q	D	V	V	N	K	V	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	K	E	V	L	E	I	A	E	K	I	K	N	M	E	I	R	G	A	G	K	I	A	R	S	A	A	Y	A	L	Q	L	Q	A	E	K	S	K	A	T	N	V	D	E	F	W	K	E	M	K	Q	A	A	K	I	L	F	E	T	R	P	T	A	V	S	L	P	N	A	L	R	Y	V	M	H	R	G	K	I
Template Known Secondary structure															T	T	S	S		S																		S					S	T	T																		S	S		S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	L	R	T	I	M	E	G	Q	S	I	V	N	V	D	E	I	H	R	A	A	R	F	F	Y	Q	A	R	Q	R	D	L	Y	G	A	G	G	S	N	A	I	C	A	D	V	Q	H	K	F	L	R	I	G	V	R	C	Q	A	Y	P	D	A	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Y	S	S	G	A	D	L	E	Q	L	R	F	V	I	I	N	A	A	K	E	F	I	H	N	S	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	I
Template Known Secondary structure				T	T	T																							T											T	T			T	T							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																								.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	M	M	S	A	S	L	L	Q	E	G	D	V	V	L	V	V	T	H	S	G	R	T	S	D	V	K	A	A	V	E	L	A	K	K	N	G	A	K	I	I	C	I	T	H	S	Y	H	S	P	I	A	K	L	A	D	Y	I	I	C
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		S	V	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	E	T	R	P	K	W	Q	G	.	K	I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y	V	V	D	S	A	A	R	H	Y	M	K	M	T	D	K	V	V	M
Template Known Secondary structure										T	T											T	T	T	T			.										T	T								G	G	G	T	T	T	T	G	G	G		S
Template Predicted Secondary structure																												.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions