Job Description P0ACS7 Confidence 99.82% Date Thu Jan 5 11:18:55 GMT 2012 Rank 10 Aligned Residues 161 % Identity 19% Template c2yvaB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa Resolution 1.85 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																										.	.	.																																					.	.	.	.	.	.
Query SS confidence																										.	.	.																																					.	.	.	.	.	.
Query Sequence		Q	D	V	V	N	K	V	F	N	I	T	L	R	T	I	M	E	G	Q	S	I	V	N	V	.	.	.	D	E	I	H	R	A	A	R	F	F	Y	Q	A	R	Q	R	D	L	Y	G	A	G	G	S	N	A	I	C	A	D	V	Q	H	K	F	L	.	.	.	.	.	.	R	I	G	V	R	C	Q	A	Y	P	D
Query Conservation																										.	.	.																																					.	.	.	.	.	.
Alig confidence																										.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	R	I	K	A	C	F	T	E	S	I	Q	T	Q	I	A	A	A	E	A	L	P	D	A	I	S	R	A	A	M	T	L	V	Q	S	L	L	N	G	N	K	I	L	C	C	G	N	G	T	S	A	A	N	A	Q	H	F	A	A	S	M	I	N	R	F	E	T	E	R	P	S	L	P	A	I	A	L	N	T
Template Known Secondary structure																							S																	T	T								S	T															T		S	S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		176	.	.	.	180	.	.	.																.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Query Sequence		A	H	I	M	M	M	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	L	Q	E	G	D	V	V	L	V	V	T	H	S	G	R	T	S	D	V	K	A	A	V	E	L	A	K	K	N	G	A	K	I	I	C	I	T	H	S	Y	H	S	P	I	A	K	L	.	.	.	A	D	Y	I	I
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation
Template Sequence		D	N	V	V	L	T	A	I	A	N	D	R	L	H	D	E	V	Y	A	K	Q	V	R	A	L	G	H	A	G	D	V	L	L	A	I	S	T	R	G	N	S	R	D	I	V	K	A	V	E	A	A	V	T	R	D	M	T	I	V	A	L	T	G	Y	D	G	G	E	L	A	G	L	L	G	P	Q	D	V	E	I
Template Known Secondary structure										T	T	S	T	T	G	G	G	T	T										T	T								S	S	S															T	T									T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	P	A	P	E	T	P	L	L	G	R	N	A	S	A	R	I	L	Q	L	T	L	L	D	A	F	F	V	S	V	A	Q	L
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		R	I	P	S	H	R	S	A	R	.	.	.	.	.	.	I	Q	E	M	H	M	L	T	V	N	C	L	C	D	L	I	D	N	T
Template Known Secondary structure				S		S					.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170							.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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