Job Description P0ACS7 Confidence 93.39% Date Thu Jan 5 11:18:55 GMT 2012 Rank 156 Aligned Residues 130 % Identity 13% Template c2xznB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		128	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		V	D	E	I	H	R	A	A	R	F	F	Y	.	.	.	.	Q	A	R	Q	R	D	L	Y	G	A	G	G	S	N	A	I	C	A	D	V	Q	H	K	F	L	R	I	G	V	R	C	Q	A	Y	P	D	A	H	I	M	M	M	S	A	S	L	L	Q	E	G	D	V	V	L	V	V	T	H	S	G	R	T	S	D
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																																																														.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		W	Q	K	I	K	L	A	A	R	V	I	A	A	V	Q	H	P	E	D	V	M	V	V	C	S	R	I	Y	G	Q	R	A	A	I	K	F	A	G	Y	T	H	C	K	S	T	S	S	S	R	W	T	P	G	T	L	T	N	Y	Q	T	L	K	Y	E	E	P	R	V	L	I	V	T	D	P	R	S	D	.	.	.
Template Known Secondary structure																S	S	G	G	G							S															T		B					S	S			T	T	T	T	T		T	T		S	S					S					S		T	T	T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	A	V	E	L	A	K	K	N	G	A	K	I	I	C	I	T	H	S	Y	H	S	P	I	A	K	L	A	D	Y	I	I	C	S	P	A	P	E	T	P	L	L	G	R	N	A	S	A	R	I	L	Q	L	T	L	L	D	A	F	F	V	S	V	A	Q	L	N	I
Query Conservation
Alig confidence		.																									.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation		.																									.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		.	F	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	C	D	S	D	S	P	L	.	.	A	Y	V	D	V	V	I	P	C	N	N	R	.	.	.	.	.	.	.	.	.	.	S	T	E	S	I	S	M	I	Y	W	M	I	A	R	E	V	K	I	L	R	G
Template Known Secondary structure		.								T	T	T	T									S	S	S			.	.	T	T							S			S	.	.	.	.	.	.	.	.	.	.	S																				T
Template Predicted Secondary structure		.																									.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
			127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.											.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions