Job Description P0ACS7 Confidence 94.79% Date Thu Jan 5 11:18:55 GMT 2012 Rank 117 Aligned Residues 138 % Identity 10% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	M	E	G	Q	S	I	V	N	V	D	E	I	H	R	A	A	R	F	F	Y	Q	A	R	Q	R	D	L	Y	G	A	G	G	S	N	A	I	C	A	D	V	Q	H	K	F	L	R	I	G	V	R	C	Q	A	Y	P	D	A	H	I	M	M	M	S	A	S	L	L	Q	E	G	D	V	V	L	V	V	T	H
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		N	V	G	K	T	W	E	K	L	.	.	V	L	A	A	R	I	I	A	A	I	P	N	P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	T	D	P
Template Known Secondary structure											.	.										T	T	T	T									S													T	S	S						S				T	T	T	T	T	T	T	T	T	S		S				S					S		T
Template Predicted Secondary structure											.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	R	T	S	D	V	K	A	A	V	E	L	A	K	K	N	G	A	K	I	I	C	I	T	H	S	Y	H	S	P	I	A	K	L	A	D	Y	I	I	C	S	P	A	P	E	T	P	L	L	G	R	N	A	S	A	R	I	L	Q	L	T	L	L	D	A	F	F	V	S	V	A	Q	L	N	I
Query Conservation
Alig confidence					.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	D	.	.	.	.	A	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	T	D	L	D	S	P	S	.	.	E	F	V	D	V	A	I	P	C	N	N	R	.	.	.	.	.	.	.	.	.	.	G	K	H	S	I	G	L	I	W	Y	L	L	A	R	E	V	L	R	L	R	G
Template Known Secondary structure		T	T	T	.	.	.	.											T									T	T	S		G	.	.	G	G		S					S		S	S	.	.	.	.	.	.	.	.	.	.																					T
Template Predicted Secondary structure					.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions