Job Description P0ACS7 Confidence 82.27% Date Thu Jan 5 11:18:55 GMT 2012 Rank 298 Aligned Residues 102 % Identity 14% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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		26	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	M	T	E	N	E	S	R	.	I	V	E	W	L	L	K	P	G	N	L	S	C	A	P	A	I	K	D	V	A	E	A	L	A	V	S	E	A	M	I	V	K	V	S	K	L	L	G	F	S	G	F	R	N	L	R	S	A	L	E	D	Y	F	S	Q	S	E	Q	V	L	P	S	E	L	A	F	D	E	A	P
Query Conservation										.
Alig confidence										.									.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	T	F	R	E	K	S	R	I	I	Q	E	V	E	E	N	.	.	.	.	P	D	L	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K	N	.	.	.	.	.	.	.	.	.	K	R	A	I	L	A	S	E	R	K	Y	G	V	A	S	T	C	R	K	T	N	K	L	S	P
Template Known Secondary structure																			.	.	.	.	T	T	S										T												T	.	.	.	.	.	.	.	.	.												G	G	G	G	G	T								T
Template Predicted Secondary structure																			.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	V	V	N	K	V	F	N	I	T	L	R	T	I	M	E	G	Q	S	I	V	N	V	D	E	I	H	R	A	A	R	F	F	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	K	L	E	G	L	L	I	A	W	F	Q	Q	I	R	A	A	G	L	P	V	K	G	I	I	L	K	E	K	A	L	R	I	A	E
Template Known Secondary structure		T															G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions