 |
Job Description | P77277 | Confidence | 99.36% | Date | Thu Jan 5 12:27:07 GMT 2012 |
Rank | 48 | Aligned Residues | 132 |
% Identity | 18% | Template | d2fsja1 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Ta0583-like
|
Resolution | 1.90 |
|
 |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | |
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
Q | L | D | N | A | G | V | V | D | I | G | G | G | T | T | G | I | A | I | V | K | K | G | K | V | T | . |
. |
. |
. |
Y | S | A | D | E | A | T | G | G | H | H | I | S | L | T | L | A | G | N | R | . |
. |
. |
. |
. |
. |
R | I | S | L | E | E | A | E | Q | Y | K | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . |   |
|   |   |   |
|
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
Q | P | G | Y | G | V | V | I | D | V | G | S | R | T | T | D | V | L | T | I | N | L | M | D | M | E | P | V | V | E | L | S | F | S | L | Q | I | G | V | G | D | A | I | S | A | L | S | R | K | I | A | K | E | T | G | F | V | V | P | F | D | L | A | Q | E | A | L | S | H | P | V | M | F | R | Q | K | Q | V | G | G |
Template Known Secondary structure |   |
| S | S |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  | T | T | T | T |  |  |
| G | G | G |
|  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  | T | T |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
  |
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | |
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | |
. | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | E | I | W | P | A | V | K | P | V | Y | E | K | M | A | D | I | V | A | R | H | I | E | G | Q | . |
. |
G | I | T | D | L | W | L | A | G | G | S | C | M | Q | P | G | V | A | E | L | F | R | K | Q | F | P | A | L | Q | V | . |
H | L | P | Q | H | S | L | F | M | T | P | L | A | I | A | S | S | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . |   |
|   |   |
|
|
|   |
|
|   |
|   |
|
|   |
|   |   |   |
|   |   |   |
|   |
|   |   |
| . |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |   | . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|
Template Sequence |   |
P | E | V | S | G | P | I | L | E | D | L | A | N | R | I | I | E | N | I | R | L | N | L | R | G | E | V | D | R | V | T | S | L | I | P | V | G | G | G | S | N | L | . |
. |
I | G | D | R | F | E | E | I | A | P | G | T | L | V | K | I | K | P | E | D | L | Q | F | A | N | A | L | G | Y | R | D | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | G |  |  |  |  |  |  |  | S | T | T |  |  |  | . | . |  | G | G | G | G | G | G | G | S | T | T |
| B |
|
|
|
| T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | |
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|