Job Description P77277 Confidence 99.72% Date Thu Jan 5 12:27:07 GMT 2012 Rank 26 Aligned Residues 213 % Identity 12% Template d2ewsa1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Fumble-like Resolution 2.05

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	S	H	A	A	T	S	F	P	P	G	T	D	P	R	I	S
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template Sequence		M	K	V	G	I	D	A	G	G	T	L	I	K	I	V	Q	E	Q	D	N	Q	R	T	F	K	T	E	L	T	K	N	.	.	.	.	.	.	.	.	.	.	I	D	Q	V	V	E	W	L	N	Q	.	.	.	.	.	.	.	.	.	.	Q	Q	I	E	K	L	C	L	T	G	G	N	.	.	.	.	.	.	.
Template Known Secondary structure										S	S									S	S									G	G	G	.	.	.	.	.	.	.	.	.	.										T	.	.	.	.	.	.	.	.	.	.	S			S						S	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.											.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		I	N	V	L	E	S	A	G	L	E	V	S	H	V	L	D	E	P	T	A	V	A	D	L	L	Q	.	.	.	.	.	.	.	.	L	D	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V	T	Y	S	A	D	E	A	T	G	G	H	H	I	S	L	T	L	A	G	N	R	R
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	V	I	A	E	N	I	N	I	P	A	Q	I	F	V	E	F	D	A	A	S	Q	G	L	G	I	L	L	K	E	Q	G	H	D	L	A	D	Y	I	F	A	N	V	G	T	G	T	S	L	H	Y	F	D	G	Q	S	Q	R	R	V	G	G	I	G	T	G	G	G	M	I	Q	G	L	G	Y	L	L	S	Q
Template Known Secondary structure							T	T	S	S	S																						T	T				S								S	S	S								S	S									S		S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		182	.		.	.	.	.	.	.	190	.	.	.																																				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	.	L	E	E	A	E	Q	Y	K	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	M	A	D	I	V	A	R	H	I	E	G	Q	G	I	T	D	L
Query Conservation				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	D	Y	K	Q	L	T	D	M	A	Q	H	G	D	R	N	T	I	D	L	K	V	R	H	I	I	P	G	D	L	T	A	A	N	F	G	H	V	L	H	H	L	D	A	D	F	T	P	S	N	K	L	A	A	V	I	G	V	V	G	E	V	V	T	T	M	A	I	T	V	A	R	E	F	K	T	E	N	I
Template Known Secondary structure													T	T				T	T	T				T	T	T				T	T	S				T	T	T	T	G	G	G		T	T	S																														T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		226	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																.	.
Query SS confidence							.																.	.
Query Sequence		W	L	A	G	G	.	S	C	M	Q	P	G	V	A	E	L	F	R	K	Q	F	.	.	P	A	L	Q	V	H	L	P	Q	H	S	L	F	M	T	P	L	A	I	A	S	S	G	R
Query Conservation							.																.	.
Alig confidence							.																.	.
Template Conservation
Template Sequence		V	Y	I	G	S	S	F	H	N	N	A	L	L	R	K	V	V	E	D	Y	T	V	L	R	G	C	K	P	Y	Y	V	E	N	G	A	F	S	G	A	I	G	A	L	Y	L	E	K
Template Known Secondary structure					S	G	G	G	T	T															T	T							T	T	G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions