 |
Job Description | P77277 | Confidence | 87.66% | Date | Thu Jan 5 12:27:07 GMT 2012 |
Rank | 146 | Aligned Residues | 60 |
% Identity | 18% | Template | d1nu0a_ |
SCOP info | Ribonuclease H-like motif
| Ribonuclease H-like
| Putative Holliday junction resolvase RuvX
|
Resolution | 1.60 |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | L | G | V | D | L | G | T | C | D | V | V | S | M | V | V | D | R | D | G | . |
. |
. |
Q | P | V | A | V | C | L | D | W | A | D | V | V | R | D | G | I | V | W | D | F | F | G | A | V | T | I | V | R | R | H | L | D | T | L | E | Q | Q | F | G | R | R | F | S | H | A | A | T | S | F | P | P | G | T | D | P |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |   | . | . | . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|
Template Sequence |   |
L | X | A | F | D | F | G | T | K | S | I | G | V | A | V | G | Q | R | I | T | G | T | A | R | P | L | P | A | I | K | A | Q | D | G | T | . |
. |
. |
. |
. |
. |
P | D | W | N | I | I | E | R | L | L | K | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | Q | P | D | E | I | I | V | G | L | P | L | N | X | D | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |  | . | . | . | . | . | . |  |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |
|
| S |  |  |  |  |  |  |  |  |
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|