|   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
. | . | . | . | . | 190 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | V | V | D | I | G | G | G | T | T | G | I | A | I | V | K | K | G | K | V | T | Y | S | A | D | E | A | T | G | G | H | H | I | S | L | T | L | A | G | N | R | R | I | S | L | . |
E | E | A | E | Q | Y | K | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|   |
|   |   | . |   |
|
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |
|
|
Template Sequence |   |
A | I | L | D | L | G | A | G | S | T | D | A | A | I | V | N | A | E | G | Q | I | T | A | V | H | L | A | G | A | G | N | M | V | S | L | L | I | K | T | E | L | G | L | E | D | L | S | L | A | E | A | I | K | K | Y | P | L | A | K | V | E | S | L | F | S | I | R | H | E | N | G | A | V | E | F | F | R | E | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |
| S | S | S |  |  |  |  | T | T | S |
|  |  |  |
| S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
. | . | . | . | . | . | . | 220 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | G | E | E | I | W | P | A | V | K | P | V | Y | E | K | M | A | D | I | . |
V | A | R | H | I | E | G | Q | G | I | . |
. |
. |
. |
. |
. |
. |
T | D | L | W | L | A | G | G | S | C | M | Q | P | G | V | A | E | L | F | R |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . |   |   |
|
|
|   |
|
|   |
|   |
|
|   |
|   |   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
Template Sequence |   |
S | P | A | V | F | A | K | V | V | Y | I | K | E | G | E | L | V | P | I | D | N | A | S | P | L | E | K | I | R | L | V | R | R | Q | A | K | E | K | V | F | V | T | N | C | L | R | A | L | R | Q | V | S | P | G | G | S | I | R | D | I | A | F | V | V | L | V | G | G | S | S | L | D | F | E | I | P | Q | L | I | T |
Template Known Secondary structure |   |
| G | G | G | T | T |
|  |  |  |  |  | T | T |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S | T | T |
|
| S | T | T |
|
|  |  |  |  |  | S | G | G | G | G | S | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
492 | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . |
  |
  |   |
243 | . | . | . | . | . | . | 250 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | F | P | A | L | Q | V | H | L | P | . |
. |
. |
. |
. |
. |
. |
Q | H | S | L | F | M | T | P | L | A | I | A | S | S | G | R | E |
Query Conservation |   |
  |   |
|   |
|   |   |
|   |   |   | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |
|
|   |
|
|   |
|
|   |
|   |   |
|
|
|   |
|
|
|   |
|
|   |
|
|   |   |   |
Template Sequence |   |
E | A | L | S | H | Y | G | V | V | A | G | Q | G | N | I | R | G | T | E | G | P | R | N | A | V | A | T | G | L | L | L | A | G | Q | A |
Template Known Secondary structure |   |
 |  |  |  | T | T | T |
|  |  |  |  |
|
| G | G | G | T | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
572 | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . |
  |