Job Description P77277 Confidence 64.83% Date Thu Jan 5 12:27:07 GMT 2012 Rank 157 Aligned Residues 234 % Identity 12% Template c3t69A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative 2-dehydro-3-deoxygalactonokinase; PDBTitle: crystal structure of a putative 2-dehydro-3-deoxygalactonokinase2 protein from sinorhizobium meliloti Resolution 2.55 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.														.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	A
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		Y	Y	A	A	V	D	W	G	T	S	S	F	R	L	W	I	I	G	E	D	G	A	V	L	A	E	R	R	S	A	E	G	M	T	T	.	.	.	.	A	A	K	T	G	F	H	T	I	L	D	G	H	L	A	A	V	S	A	P	A	H	L	P	I	I	I	C	G	M	A	G	A	R	Q	G	W	K	E	A	G
Template Known Secondary structure										S	S									T	T	S									S						.	.	.	.																	T	T			T	T								G	G	G	S	T	T	S	S	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	S	F	P	P	G	T	D	P	R	I	S	I	N	V	L	E	S	A	G	L	E	V	S	H	V	L	D	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	V	A	D	L	L	Q	L	D	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	I	E	T	P	A	A	L	A	E	I	A	G	R	A	T	A	I	P	D	V	D	R	D	I	R	I	L	P	G	L	A	Q	R	D	R	R	H	P	D	V	M	R	G	E	E	T	Q	L	L	G	A	A	A	H	L	G	A	G	S	H	L	V	C	M	P	G	T	H	S	K	W	V	R	L	A	D	D	R	V
Template Known Secondary structure					S	S			T	T					T					S	S	S	S	S													T	T	S					S	S										T	T	S		S	S								S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		160	.																										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Query Sequence		T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	E	A	T	G	G	H	H	I	S	L	T	L	A	G	N	R	R	I	S	L	E	E	A	E	Q	Y	K	R	G	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	F	S	T	F	M	T	G	E	L	F	D	T	I	A	R	H	T	I	L	S	H	A	V	A	E	A	D	T	F	A	A	G	S	A	A	F	T	D	A	V	S	R	T	R	E	N	P	A	L	A	T	N	L	L	F	S	V	R	A	G	Q	L	L	H	G	T	A	A	A	D	A	R	A	Q	L	S	G	T
Template Known Secondary structure																				S	T	T					T	T		S				T	T	S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
			209	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure		.											.
Query SS confidence		.											.
Query Sequence		.	M	A	D	I	V	A	R	H	I	E	.	G	Q	G	I	T	D	L	W	L	A	G	G	S	C	M	Q	P	G	V	A	E	L	F	R	K	Q	F	P	A	L	Q	V	H	L	P	Q	H	S	L	F	M	T	P	L	A	I	A	S	S	G	R	E
Query Conservation		.											.
Alig confidence		.											.																										.		.								.
Template Conservation																																							.		.								.
Template Sequence		L	I	G	L	E	I	A	G	A	L	A	G	S	G	S	V	D	G	V	C	L	V	G	S	G	G	L	G	T	L	Y	R	T	A	L	E	S	.	Q	.	G	L	N	V	R	A	V	.	D	A	D	E	A	V	R	A	G	L	S	A	A	A	R	A
Template Known Secondary structure												T	T		S	S																							.	T	.	T							.
Template Predicted Secondary structure																																							.		.								.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.		.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions