Job Description P77277 Confidence 47.25% Date Thu Jan 5 12:27:07 GMT 2012 Rank 169 Aligned Residues 202 % Identity 21% Template c3khyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:propionate kinase; PDBTitle: crystal structure of a propionate kinase from francisella2 tularensis subsp. tularensis schu s4 Resolution 1.98 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	.	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	.	.	.	.	.	.	.	.	.	.	.	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	S	H	A	A	T
Query Conservation																			.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	V	L	N	C	G	S	S	S	V	K	F	A	L	I	N	P	H	T	S	Q	S	L	V	T	G	L	A	E	N	I	A	T	K	N	C	K	V	V	F	K	A	E	H	K	I	V	K	Y	L	E	N	G	S	Y	K	D	V	F	E	X	L	K	D	F	L	V	E	N	K	H	L	E	K	I	V	A	I	G
Template Known Secondary structure									S	S									T	T	T	T										S	T	T	S	T	T							S	S	S							T	T																	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		99	100
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	V	V	H	G	G	Q	Y	F	S	K	S	V	L	I	N	A	D	S	L	E	K	I	K	A	C	I	A	L	A	P	L	H	N	P	A	H	I	E	G	I	R	F	C	Q	Q	I	F	P	E	L	P	Q	V	A	V	F	D	T	A	F	H	Q	T	X	P	S	Y	I	A	E	Y	A	I	P	Y	E	L	T
Template Known Secondary structure					S			T	T	T		S	S					S										T	G	G	G	S	T	T	T															S	T	T	S							T	T	G	G	G	G	G	S						S		S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
								101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																																	.	.						.	.	.
Query SS confidence		.	.	.	.	.	.																																																																	.	.						.	.	.
Query Sequence		.	.	.	.	.	.	P	P	G	T	D	P	R	I	S	I	N	V	L	E	S	A	G	L	E	V	S	H	V	L	D	E	P	T	A	V	A	D	L	L	Q	L	D	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V	T	Y	S	A	D	.	.	E	A	T	G	G	.	.	.
Query Conservation		.	.	.	.	.	.																																																																	.	.						.	.	.
Alig confidence		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.																							.															.	.						.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		H	K	H	N	I	R	K	Y	G	A	H	G	T	S	H	K	Y	V	S	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	A	A	K	I	L	T	Q	Q	K	A	N	V	I	V	A	H	L	G	N	G	C	S	.	I	T	A	V	V	D	G	K	S	I	D	T	S	X	G	L	T	P	L	D	G	L	V	X
Template Known Secondary structure			T	S			S				S												.	.	.	.	.	.	.	.	.	.	.	.					S		S	S										S	S	S			.						T	T						S			S	S	T	T	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	H	H	I	S	L	T	L	A	G	N	R	R	I	S	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Q	Y	K	R	G	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	M	A	D	I	V	A	R	H	I	E	G
Query Conservation		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	R	S	G	C	I	D	P	S	I	F	A	Y	I	S	D	N	L	G	W	S	V	T	E	I	T	N	X	L	N	K	Q	S	G	L	L	G	I	C	G	H	N	D	X	R	E	V	S	Q	L	A	A	K	G	D	S	L	A	K	L	A	I	E	I	F	S	H	R	V	A	K	F	V	A	S	Y	X	I	Y
Template Known Secondary structure		S	S				S			T	T																							S								S													T	T																							G	G	G
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		220	.		.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure				.												.
Query SS confidence				.												.
Query Sequence		Q	G	.	I	T	D	L	W	L	A	G	G	S	C	.	M	Q	P	G	V	A	E	L	F	R	K	Q	F
Query Conservation				.												.
Alig confidence				.												.
Template Conservation
Template Sequence		F	N	K	L	D	A	L	V	F	T	G	G	I	G	E	N	A	A	N	I	R	K	N	I	I	S	K	L
Template Known Secondary structure			S	S																									T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions