Job Description P77277 Confidence 99.24% Date Thu Jan 5 12:27:07 GMT 2012 Rank 60 Aligned Residues 228 % Identity 15% Template c3eo3B_ PDB info PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein Resolution 2.84 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	S	H	A	A	T	S	F	P	P	G	T	D	P	R	I	S	I
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.
Template Sequence		A	L	A	V	D	L	G	G	T	N	L	R	V	A	I	V	S	M	K	G	E	I	V	K	K	Y	T	Q	F	N	P	K	.	.	.	.	.	.	.	T	Y	E	E	R	I	N	L	I	L	Q	M	C	V	E	A	A	A	E	A	V	K	L	N	C	R	I	L	G	V	G	I	S	T	D	L	R	T	P	L	S
Template Known Secondary structure									S	S	S								T	T													S	.	.	.	.	.	.	.	S																						T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440								.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																		.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	L	E	S	A	G	L	E	V	S	H	V	L	D	E	P	T	A	V	A	D	L	L	.	.	.	.	.	.	.	Q	L	D	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	E	A
Query Conservation																										.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																.	.	.	.	.	.	.														.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																																				.
Template Sequence		D	T	L	H	L	.	.	.	.	P	V	W	V	D	N	D	G	N	C	A	A	L	A	E	R	K	F	G	Q	G	K	G	L	E	N	F	V	T	L	I	T	G	T	G	.	I	G	G	G	I	I	H	Q	H	E	L	I	H	G	S	S	F	C	A	A	E	L	G	H	L	V	V	S	L	D	G	P	D	C	S
Template Known Secondary structure						S	.	.	.	.																		T	S	T	T	T	T		S	S							S	S	S	.								T	T						T	T	S					G	G	G		B			S	S			B		T
Template Predicted Secondary structure							.	.	.	.																																				.
Template SS confidence
		506	.	.	.	510					.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.		.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.																						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	G	H	H	I	S	L	T	L	A	G	N	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	L	E	E	A	E	Q	Y	K	R	G	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	M	A	D	I	V	A	R	H	I	E	G	Q	G	I	T	D	L
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	G	S	H	G	C	I	E	A	Y	A	S	G	M	A	L	Q	R	E	A	K	K	L	H	D	E	D	L	L	L	V	E	G	M	S	A	V	G	A	L	H	L	I	Q	A	A	K	L	G	N	A	K	A	Q	S	I	L	R	T	A	G	T	A	L	G	L	G	V	V	N	I	L	H	T	M	N	P	S	L	V
Template Known Secondary structure		T	S		B	S	B						S														T	T		S			S	S															T	T																													S
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		226	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure											.	.													.	.	.	.
Query SS confidence											.	.													.	.	.	.
Query Sequence		W	L	A	G	G	S	C	M	Q	.	.	P	G	V	A	E	L	F	R	K	Q	F	P	.	.	.	.	A	L	Q	V	H	L	P	Q	H	S	L	F	M	T	P	L	A	I	A	S	S	G	R	E	K
Query Conservation											.	.													.	.	.	.
Alig confidence											.	.													.	.	.	.												.
Template Conservation																																								.
Template Sequence		I	L	S	G	V	L	A	S	H	Y	I	H	I	V	K	D	V	I	R	Q	Q	A	L	S	S	V	Q	D	V	D	V	V	V	S	D	L	V	D	.	P	A	L	L	G	A	A	S	M	V	L	D	Y
Template Known Secondary structure					S	T	T																S		G	G	G	T	T									S	S	.													T
Template Predicted Secondary structure																																								.
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.		.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions