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Job DescriptionP77277
Confidence99.51%DateThu Jan 5 12:27:07 GMT 2012
Rank37Aligned Residues234
% Identity22%Templatec2zf5O_
PDB info PDB header:transferaseChain: O: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of highly thermostable glycerol kinase from a2 hyperthermophilic archaeon
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60... ......70.........80.........90 .........100...
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Query Sequence  SPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWADVV. . . RDGIVWDFFGAVTIVRRHLDTLEQQFG. RRFSHAATSFPPG
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Template Sequence  EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVTNQ
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SS
TT




B

STT


T

GGG
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   104
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Query Sequence  T. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKGEVMFGT
Template Known Secondary structure  SS

TT

BSS

TT

TTSS


TTSSTTTT

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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   105....110.........120...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DPRISINVLESAGLEVSHV
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Template Sequence  VDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKE. . . . . LLGAEIPVSGD
Template Known Secondary structure  S

TTSSSTTTT
TT

GGG


S

.....SS

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   162.......170.........180.........190.........200.........210.........220..... ....230......
 
   124.....130...... ...140.........150...... ...160.........170.........180..
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Query Sequence  LDEPTAVADLLQL. . DNAGVVDIGGGTTGIAIVKK. . . . . . . . . . . . . . . . . . . GKVTYSADEATGGHHISLTLAGNRRI
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Template Sequence  AGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRVSYALEGSIFVTGAAV. QWLRDGIKI
Template Known Secondary structure  TT

STT
SSST




TTSTTS
S.TS

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   237..240.........250.........260.........270.........280.........290.........300...... ...310.....
 
   183......190... ......200.........210.........220...
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Query Sequence  SLEEAEQYKRG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HGEEIWPAVKPVYEKMADIVARHIEGQGIT
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Template Sequence  IKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEKLVQIK
Template Known Secondary structure 
S
GGGTTSSS
TT


TT
B
TTT
BTT





TT

TTTS


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   316...320.........330.........340.........350.........360.........370.........380.........390.....
 
   224.....230.........240.........250.........260.........
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Query Sequence  DLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGR
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Template Sequence  ELRVDGGATANDFLMQFQADIL. NRKVIRPVVKE. TTALGAAYLAG
Template Known Secondary structure 
SGGGG
.TS
S
S
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   396...400.........410....... ..420........ .430.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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