Job Description P77277 Confidence 98.74% Date Thu Jan 5 12:27:07 GMT 2012 Rank 83 Aligned Residues 248 % Identity 15% Template c2q2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase 1, putative; PDBTitle: trypanosoma cruzi glucokinase in complex with beta-d-glucose and adp Resolution 2.10 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	P	A	A	T	E	S	P	L	W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	S	H	A	A	T	S	F
Query Conservation
Alig confidence								.																																							.	.	.
Template Conservation								.																																							.	.	.
Template Sequence		K	T	P	A	W	N	.	A	P	L	T	F	V	G	D	V	G	G	T	S	A	R	M	G	F	V	R	E	G	K	N	D	S	V	H	A	C	V	T	R	Y	S	M	K	R	.	.	.	K	D	I	T	E	I	I	E	F	F	N	E	I	I	E	L	M	P	A	S	V	M	K	R	V	K	A	G	V	I	N	V
Template Known Secondary structure		T	S	G	G	G		.	S										S	S											G	G	G												T	T	.	.	.		B	G	G	G												S						T	T
Template Predicted Secondary structure								.																																							.	.	.
Template SS confidence
		16	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		101	.															.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	D	P	R	I	S	I	N	V	L	E	S	A	G	L	E	V	S	H	V	L	D	E	P	T	A	V	A	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	P	V	T	G	G	A	V	G	G	P	F	N	N	L	K	G	I	A	R	L	S	D	Y	P	K	A	L	F	P	P	G	H	S	A	I	L	N	D	L	E	A	G	G	F	G	V	L	A	V	S	D	A	H	V	F	S	E	Y	F	G	V	M	W	E	G	T	Q	W	R	T	C	E	Q	E	P	A	G	S
Template Known Secondary structure		S	S				T	T	T						S	S	S	B	S				G	G	G	S		T	T	T	S		T	T	S																				T	T													T	T	T	T	T	T		S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
				135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.																											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Q	L	D	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V	T	.	.	.	.	.	.	.	Y	S	A	D	E	A	T	G	G	H	H	I	S	L	T	L	A	G	N	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																											.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	G	R	G	R	C	L	V	L	A	P	G	T	G	L	G	S	S	L	I	Y	Y	N	P	Q	H	I	V	V	P	L	E	L	G	S	Q	T	L	P	M	R	K	D	I	D	Y	I	Q	T	L	H	A	E	L	K	L	F	P	N	Y	E	N	M	V	S	G	A	G	L	E	F	H	Y	R	Q	V	V	R	G
Template Known Secondary structure		S			S	S								S	S	S																			G	G	G	S	B				S	S													T	S			B					S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
						182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																				.	.	.	.	.	.	.	.															.	.	.
Query SS confidence		.	.	.	.																																																				.	.	.	.	.	.	.	.															.	.	.
Query Sequence		.	.	.	.	I	S	L	E	E	A	E	Q	Y	K	R	G	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	M	A	D	I	V	A	R	H	I	E	G	Q	G	I	T	D	L	W	L	A	G	G	S	C	.	.	.	.	.	.	.	.	M	Q	P	G	V	A	E	L	F	R	K	Q	F	P	.	.	.
Query Conservation		.	.	.	.																																																				.	.	.	.	.	.	.	.															.	.	.
Alig confidence		.	.	.	.																																																				.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		S	R	P	P	C	S	A	G	E	I	A	K	L	A	S	E	G	D	A	N	A	C	K	A	M	K	K	Y	H	E	Y	L	M	R	V	G	S	E	A	S	M	A	L	L	P	L	T	I	V	L	V	G	D	N	I	V	N	N	A	F	F	Y	R	N	P	Q	N	L	K	E	M	H	H	E	A	L	N	H	E	M
Template Known Secondary structure		S	S														T	T																													S						S						T						S												T		S	G	G
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
									247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	L	Q	V	H	L	P	Q	H	S	L	F	M	T	P	L	A	I	A	S	S	G	R	E	K	A
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	F	G	F	Q	S	R	V	S	Y	L	R	Q	K	K	L	L	N	L	N	L	M	G	C	Y	R	C	G	L	D	L	S
Template Known Secondary structure		G	G	G	T	S	G	G	G								S																T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions