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Job DescriptionP77277
Confidence99.87%DateThu Jan 5 12:27:07 GMT 2012
Rank19Aligned Residues236
% Identity19%Templatec2p9lA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:actin-like protein 3; PDBTitle: crystal structure of bovine arp2/3 complex
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50 ...... ...60.........70.........80...
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Query Sequence  LGVDLGTCDVVSMVVDRDG. . . . . . QPVAVC. . . . . . . . . . . . . . . . . . . . . . LDWADVVRDGIVWDFFGAVTIVRRHLD
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Template Sequence  CVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKEVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIF
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SSGGG

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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   84.....90.........100.........110...... ...120.........130....... ..140.........150..
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Query Sequence  TLEQQFGRRFSHAATSFPPGTDPRISINVLESA. . . . GLEVSHVLDEPTAVADLLQLD. . . . . . . NAGVVDIGGGTTGIA
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Template Sequence  KYLRA. EPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSQVGERTLTGTVIDSGDGVTHVI
Template Known Secondary structure  TTT

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   99100... ......110.........120.........130.........140.........150.........160.........170.......
 
   153......160 .........170.........180. ........190...
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Query Sequence  IVKKGKVT. . YSADEATGGHHISLTLAGNRR. . . . . . . . . ISLEEAEQYKRG. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTG
Template Known Secondary structure  TT
GGG
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   179180.........190.........200.........210.........220.........230.........240.........250........
 
   194.....200....... ..210.........220.. .......230.........240....
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Query Sequence  . . . . . . . . . . . . HGEEIWPAVKPVYE. . . . . . . . . . KMADIVARHIEGQGI. . . . . . . TDLWLAGGSCMQPGVAELFRKQ
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Template Sequence  INAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRD
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TTTT
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   259260.........270.........280.........290.........300.........310.........320.........330........
 
   245 ....250.........260........
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Query Sequence  F. . . . . . . . . . . . . . . . . . . PALQVHLPQHSLFMTPLAIASSG
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Template Sequence  LKRTVDARLKLSEELSKPKPIDVQVITHHMQRYAVWFGGSMLA
Template Known Secondary structure  T










TTGGGT
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   339340.........350.........360.........370.........380.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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