Job Description P77277 Confidence 98.34% Date Thu Jan 5 12:27:07 GMT 2012 Rank 90 Aligned Residues 226 % Identity 13% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	S	H	A	A	T	S	F	P	P	G	T	D	P	R	I	.	.
Query Conservation																																																																																.	.
Alig confidence																																				.	.	.	.																																									.	.
Template Conservation																																				.	.	.	.
Template Sequence		I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	.	.	.	.	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	S	S	I	R	A	V	Y	F	Y	G	A	G	C	T	P	A	K	A	P	X
Template Known Secondary structure									S	S									T	T													T	T	T	.	.	.	.	S										T	T	T	T					T	T	S	T	T	T									T	T			T	T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
			109	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.
Predicted Secondary structure		.											.																																													.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query SS confidence		.											.																																													.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	I	N	V	L	E	S	A	G	L	.	E	V	S	H	V	L	D	E	P	T	A	V	A	D	L	L	Q	L	D	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V	T	Y	S	.	.	.	.	.	.	.	.	A	D	E	A	T	G	.	.	.	.	.	.	.	.	.	.
Query Conservation		.											.																																													.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Alig confidence		.											.																																													.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	L	C	G	D	S	E	G	I	A	C	I	L	G	T	G	S	N	S	C	L	F	D	G	R	E	I	K	A	N	V	S	P	L	G	Y	I	L	G	D	E	G	S	G	A	V	L	G	R	L	F	I	G	S
Template Known Secondary structure										S	T	T		S																T	T	T	S								S	S	S								S	S	S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
								169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	H	H	I	S	L	T	L	A	G	N	R	R	I	S	L	E	E	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	R	G	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	M	A	D	I	V	A	R	H	I	E	G	Q	G	I	T
Query Conservation		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																																	.
Template Sequence		L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	F	L	A	G	F	S	P	F	I	A	Q	H	L	D	I	P	A	V	Y	S	L	V	Q	N	S	F	D	D	F	L	V	R	N	V	L	R	Y	N	R	P	D	L	.
Template Known Secondary structure				T	T		S		T	T									T	T													S	S								T	T						T	T	T	T	S																			T	G	G	G			T	T	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		D	L	W	L	A	G	G	S	C	M	.	Q	P	G	V	A	E	L	F	R	K	Q	F	P	A	L	Q	V	H	L	P	Q	H	S	L	F	M	T	P	L
Query Conservation												.
Alig confidence												.													.
Template Conservation																									.
Template Sequence		P	L	H	F	I	G	S	V	A	F	H	Y	R	E	V	L	S	S	V	I	K	K	R	.	G	L	T	L	G	S	V	L	Q	S	P	X	E	G	L	I
Template Known Secondary structure							S						T											T	.	T								S		S
Template Predicted Secondary structure																									.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions