Job Description P77277 Confidence 97.38% Date Thu Jan 5 12:27:07 GMT 2012 Rank 104 Aligned Residues 218 % Identity 17% Template c1sazA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable butyrate kinase 2; PDBTitle: membership in the askha superfamily: enzymological2 properties and crystal structure of butyrate kinase 2 from3 thermotoga maritima Resolution 2.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		W	L	G	V	D	L	G	T	C	D	V	V	S	M	V	V	D	R	D	G	Q	P	V	A	V	C	L	D	W	A	D	V	V	R	D	G	I	V	W	D	F	F	G	A	V	T	I	V	R	R	H	L	D	T	L	E	Q	Q	F	G	R	R	F	S	H	A	A	T	S	F	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		I	L	T	I	N	P	G	S	T	S	T	K	L	S	I	F	E	.	D	E	R	X	V	K	X	Q	N	F	S	H	S	P	D	E	L	G	R	F	Q	K	I	L	D	Q	L	E	F	R	E	K	I	A	R	Q	F	V	E	E	T	G	Y	S	L	S	S	F	S	A	F	V	S	R	G	G	L	L	D	P	I	P
Template Known Secondary structure									S	S									.	T	T																	T		S	S	G	G	G	G														T	T	T			G	G	G		S								S		S		B
Template Predicted Secondary structure																			.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																																																					101	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	G	T	D	P	R	I	S	I	N	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	V	Y	L	V	D	G	L	X	I	K	T	L	K	S	G	K	N	G	E	H	A	S	N	L	G	A	I	I	A	H	R	F	S	S	E	T	G	V	P	A	Y	V	V	D	P	V	V	V	D	E	X	E	D	V	A	R	V	S	G	H	P	N	Y	Q	R	K	S	I	F	H	A	L	N	Q	K	T	V	A
Template Known Secondary structure		S	S															T	T	T				T	T																						S		T	T	B					G	G	G	T	B		S	S	T	T		B					S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																										.	.	.	.																																.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																																.	.	.	.	.	.	.	.
Query Sequence		E	S	A	G	L	E	V	S	H	V	L	D	E	P	T	A	V	A	D	L	L	Q	L	D	.	.	.	.	N	A	G	V	V	D	I	G	G	G	T	T	G	I	A	I	V	K	K	G	K	V	T	Y	S	A	D	E	A	T	G	.	.	.	.	.	.	.	.	G	H	H	I	S	L	T	L	A	G	N	R	R
Query Conservation																										.	.	.	.																																.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.												.																				.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	R	X	X	N	K	R	Y	E	E	X	N	L	V	V	A	H	X	G	G	G	I	.	S	I	A	A	H	R	K	G	R	V	I	D	V	N	N	A	L	D	G	D	G	P	F	T	P	E	R	S	G	T	L	P	L	T	Q	L	V	D	L	C
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T			G	G	G									S	S	S		.							T	T								G	G	G	T		S	S			S	S				S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		163	.															.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
																												182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	L	E	E	A	E	Q	Y	K	R	G	H	G	E	E	I	W	P	A	V	K	P	V	Y	E	K	M	A	D	I	V	A	R	H	I	E	G	Q	G	.	.	I	T	D	L	W	L	A	G	G	S	C	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation
Template Sequence		F	S	G	K	F	T	Y	E	E	X	K	K	R	I	V	G	N	G	G	L	V	A	Y	L	G	T	S	D	A	R	E	V	V	R	R	I	K	Q	G	D	E	W	A	K	R	V	Y	R	A	X	A	Y	Q	I	A	K	W	I	G	K	X	A	A	V	L	K	G	E	V	D	F	I	V	L	T	G	G	L	A	H
Template Known Secondary structure		T	S	S				T	T	G	G	G	S	T	T	T	T	S		T						S													T	T																										T	T	T			S							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		234	.	.		.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure					.									.	.	.
Query SS confidence					.									.	.	.
Query Sequence		Q	P	G	.	V	A	E	L	F	R	K	Q	.	.	.	F	P	A	L	Q	V	H	L	P	Q	H	S	L	F	M	T	P	L	A	I
Query Conservation					.									.	.	.
Alig confidence					.									.	.	.
Template Conservation
Template Sequence		E	K	E	F	L	V	P	W	I	T	K	R	V	S	F	I	A	P	V	L	V	F	P	G	S	N	E	E	K	A	L	A	L	S	A
Template Known Secondary structure			T	T	T										T	T	T	S							B
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions