 |
Job Description | P75913 | Confidence | 99.32% | Date | Thu Jan 5 12:15:57 GMT 2012 |
Rank | 72 | Aligned Residues | 109 |
% Identity | 17% | Template | d1mx3a2 |
SCOP info | Flavodoxin-like
| Formate/glycerate dehydrogenase catalytic domain-like
| Formate/glycerate dehydrogenases, substrate-binding domain
|
Resolution | 1.95 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | |
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |
|  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | D | I | I | F | Y | H | P | T | F | D | T | Q | W | W | I | E | A | L | R | K | A | I | P | Q | A | R | V | R | A | W | K | S | G | D | N | D | . |
. |
. |
. |
. |
. |
. |
. |
S | A | D | Y | A | L | V | W | H | . |
. |
. |
. |
P | P | V | E | M | L | A | G | R | D | L | K | A | V | F | A | L | G | A | G | V | D |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |
|   |   |   |
|   |
|
|   |
|   |   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |
|
|   |
|   |   |   |
|   |
|   |
|
Template Sequence |   |
M | P | L | V | A | L | L | D | G | R | D | C | T | V | E | M | P | I | L | K | D | V | . |
. |
. |
A | T | V | A | F | C | D | A | Q | S | T | Q | E | I | H | E | K | V | L | N | E | A | V | G | A | L | M | Y | H | T | I | T | L | T | R | E | D | L | E | K | F | K | A | L | R | I | I | V | R | I | G | S | G | F | D |
Template Known Secondary structure |   |
|
|  |  |  |  | S | S |
| S |
|
| T | T | T |  |  |  |  | T | T | T | . | . | . |
|  |  |  |  |
|
|
| S | S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
| B |
|  |  |  |  | T | T |
| S | S |
|
|  |  |  |  | S | S | S |
|
| T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
| . | . | . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | L | S | K | L | Q | A | H | P | E | M | L | N | P | S | V | P | L | F | R | L | E | D | T | G | M | G | E | Q | M | Q | E | Y | A | V | S | Q | V | L | H | W | F | R | R | F | D | D | Y | R | I |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |
|
|   |
|   |
|   |
| . | . | . | . | . | . |
|   |
|   |   |
| . |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |
Template Sequence |   |
N | I | D | I | K | S | A | G | D | L | G | I | A | V | C | N | V | P | . |
. |
. |
. |
. |
. |
A | A | S | V | Y | S | . |
E | Q | A | S | I | E | M | R | E | E | A | A | R | E | I | R | R | A | I | T |
Template Known Secondary structure |   |
T | B |
|  |  |  |  |  |  | T | T |
|  |  |  |
|
|
| . | . | . | . | . | . | S | T | T |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
. | . | . | . | . | . | |
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|