Job Description P75913 Confidence 99.86% Date Thu Jan 5 12:15:57 GMT 2012 Rank 57 Aligned Residues 226 % Identity 15% Template c3p2yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis Resolution 1.82 Å

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		1	.	.	.	.	.	.	.	.	10	.								.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.
Predicted Secondary structure													.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence													.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		M	D	I	I	F	Y	H	P	T	F	D	.	.	.	.	.	.	.	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	D	S	A	D	Y	A	L	V	W	H	P	P	V	.	.	.	E	M
Query Conservation													.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence													.	.	.	.	.	.	.												.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																															.	.
Template Sequence		T	L	I	G	V	P	R	E	S	A	E	G	E	R	R	V	A	L	V	P	K	V	V	E	K	L	S	A	R	.	.	G	L	E	V	V	V	E	S	A	A	G	A	G	A	L	F	S	D	A	D	Y	E	R	A	G	A	T	I	G	D	P	W	P	A	D	V	V	V	K	V	N	P	P	T	S	D	E	I	S
Template Known Secondary structure											S	T	T					S	S											T	.	.	T							T	T	T	T	G	G	G	T									T	T				S			T	T	S	S					S	S								T
Template Predicted Secondary structure																															.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I	L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	L	P	E
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		Q	L	K	P	G	S	V	L	I	G	F	L	A	P	R	T	Q	P	E	L	A	S	R	L	R	I	A	D	V	T	A	F	A	M	E	S	I	P	R	I	S	R	A	Q	T	M	D	A	.	.	.	.	L	S	S	Q	A	N	V	A	G	Y	K	A	V	L	L	G	A	S	L	S	T	R	F	V	P	M	L	T
Template Known Secondary structure		T	S		T	T									T	T	T											T	T						G	G	G			S	S	G	G	G	G	G	G			.	.	.	.																					S	S		S	S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		132				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.															.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure			.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	.	.	.	H	R	E	D	F	T	I	G	I	L	G	A	G	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	S	A	F	L	S	Q	C	R	V	L
Query Conservation			.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	A	G	T	V	K	P	A	S	A	L	V	L	G	V	G	V	A	G	L	Q	A	L	A	T	A	K	R	L	G	A	K	T	T	G	Y	D	V	R	P	E	V	A	E	Q	V	R	S	V	G	A	Q	W	L	D	L	G	S	E	A	E	R	A	Q	Q	Q	Q	A	L	E	D	A	I	T	K	F	D	I	V
Template Known Secondary structure			S	S												S		S														T								S	S	G	G	G							T	T																								T	T		S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		195	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.
Predicted Secondary structure								.																											.	.
Query SS confidence								.																											.	.
Query Sequence		I	N	L	L	P	N	.	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N	L	A	.	.	R	G	V	H	V	V
Query Conservation								.																											.	.
Alig confidence								.																											.	.
Template Conservation
Template Sequence		I	T	T	A	L	V	P	G	R	P	A	P	R	L	V	T	A	A	A	A	T	G	M	Q	P	G	S	V	V	V	D	L	A	G	E	T	G	G	N	C	E
Template Known Secondary structure								T	T	S						B							T	S		T	T						T	T	G	G	G	T		S	B	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions