Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 6 Aligned Residues 299 % Identity 28% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																							.																.	.	.	.	.									.	.
Query SS confidence																							.																.	.	.	.	.									.	.
Query Sequence		D	I	I	F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	.	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	S	A	D	Y	A	L	V	W	.	.	H	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I	L	S	K
Query Conservation																							.																.	.	.	.	.									.	.
Alig confidence										.	.												.																.	.	.	.	.									.	.																								.
Template Conservation										.	.																																																																		.
Template Sequence		T	L	L	L	L	S	Q	D	.	.	N	A	H	Y	E	R	L	L	K	A	A	H	L	P	H	L	R	I	L	R	A	D	N	Q	S	D	A	E	K	L	I	G	E	A	H	I	L	M	A	E	P	A	R	A	K	P	L	L	A	K	A	N	K	L	S	W	F	Q	S	T	Y	A	G	V	D	.	V	L	L	D
Template Known Secondary structure							S	T	T	.	.											S			T	T							S	S								G	G	G		S										G	G	G	G	G	G		T	T							S	S	S			G	.	G	G	S
Template Predicted Secondary structure										.	.																																																																		.
Template SS confidence
		7	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A	G	V	L	G	S	K	V	A	Q
Query Conservation
Alig confidence															.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		A	R	C	R	R	D	Y	Q	L	T	N	V	R	.	.	.	.	.	.	G	I	F	G	P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	T	G	S	I	G	Q	H	I	A	H
Template Known Secondary structure		T	T	S			S	S							.	.	.	.	.	.	S																			T	T										T	T										S	T	T									S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N	L	A	R	G	V	H	V	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	K	H	F	G	M	K	V	L	G	V	S	R	S	G	R	E	R	A	G	F	D	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	T	R	E	T	H	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A	I	L	F	N	V	G	R	G	N	A	I	N	E
Template Known Secondary structure						T	T								S	S					T	T		S					G	G	G							T		S										S	S	S	T	T	S	B		T	T	T	T	T		S		T	T							S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	P	A	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E	K	G	E	R	V	C	G	Q	V	D	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	L	L	T	A	L	R	T	G	K	L	G	M	A	V	L	D	V	F	E	Q	E	P	L	P	A	D	S	P	L	W	G	Q	P	N	L	I	I	T	P	H	N	S	A	Y	S	F	P	D	D	V	A	Q	I	F	V	R	N	Y	I	R	F	I	D	G	Q	P	L	D	G	K	I	D	F	D
Template Known Secondary structure										T	T	S	S	S					S			S	S	S	S			T	T		T	T	T	T		T	T						S		S	S																				T	T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions