Return to main results Retrieve Phyre Job Id

Job DescriptionP75913
Confidence98.70%DateThu Jan 5 12:15:57 GMT 2012
Rank115Aligned Residues155
% Identity16%Templatec3ggpA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from a. aeolicus in2 complex with hydroxyphenyl propionate and nad+
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160 .........170........ .180.........190.........200.........
Predicted Secondary structure 






..







.....



















Query SS confidence 























. .

















. . . . .






























Query Sequence  FTIGILGAGVLGSKVAQSLQTWRF. . PLRCWSRTRKSWPGVQSF. . . . . AGREELSAFLSQCRVLINLLPNTPETVGIIN
Query Conservation   





 
 

  

  
 


 .. 
    
           .....     
  

   


    


  
  

 
Alig confidence 























..

















.....




















..







Template Conservation    
 


 
 

  

  
   
    
   
                              



  
 ..      
 
Template Sequence  QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSP. . VRTFREIA
Template Known Secondary structure 
S
STT

S
S
TTS
SS
TGGGGGG

S
S
..GGG
Template Predicted Secondary structure 



























..
Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90.........100 ........
 
   210.........220.........230.........240.........250...... ...260.........270.........280........
Predicted Secondary structure 



















.
















Query SS confidence 














































.































Query Sequence  QQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNRE. PLPPESPLWQHPRVTITPHVAAITRPAEAVEY
Query Conservation     
  

 

 



 

 


  

  

  
 
 

 


   
.

    

    

  


 
  
        
Alig confidence 














































.































Template Conservation             

   
                     

                  
    
                
Template Sequence  KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKR
Template Known Secondary structure  S
TT


S

TGGG




S

SGGG

SSTTTT



TTS
Template Predicted Secondary structure 







































Template SS confidence 















































































   109110.........120.........130.........140.........150.........160.........170.........180........
 
   289290...
Predicted Secondary structure 
Query SS confidence 




Query Sequence  ISRTI
Query Conservation     

Alig confidence 




Template Conservation 
    
Template Sequence  VWEDV
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 




   189190...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions