Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 15 Aligned Residues 299 % Identity 21% Template c2omeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:c-terminal-binding protein 2; PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h) Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																					.	.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.										.	.	.	.
Query Sequence		I	I	F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	.	.	.	S	A	D	Y	A	L	V	W	H	.	.	.	.	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I
Query Conservation																																					.	.	.	.	.	.	.	.										.	.	.	.
Alig confidence																						.	.	.													.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation																						.	.	.
Template Sequence		L	V	A	L	L	D	G	R	D	C	T	V	E	M	P	I	L	K	D	L	.	.	.	A	T	V	A	F	C	D	A	Q	S	T	Q	E	I	H	E	K	V	L	N	E	A	V	G	A	M	M	Y	H	T	I	T	L	T	R	E	D	L	E	K	F	K	A	L	R	V	I	V	R	I	G	S	G	Y	D	N	V
Template Known Secondary structure						T	T		S			T	T						T	T	T	.	.	.									S	S	G	G	G	S															S	S	S		B							T		S	S							S	S	S			T	T	B
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130										.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.
Query Sequence		L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	L	P	.	.	.	.	.	.	.	.	.	E	Y	H	R	E	D	F	T	I	G	I
Query Conservation																																																														.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		D	I	K	A	A	G	E	L	G	I	A	V	C	N	I	P	.	.	.	.	.	.	S	A	A	V	E	E	T	A	D	S	T	I	C	H	I	L	N	L	Y	R	R	N	T	W	L	Y	Q	A	L	R	E	G	T	R	V	Q	S	V	E	Q	I	R	E	V	A	S	G	A	A	R	I	R	G	E	T	L	G	L
Template Known Secondary structure									T	T								.	.	.	.	.	.	S	S	S																												T	T					S								T	T	T					T	T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		L	G	A	G	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	E	.	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		I	G	F	G	R	T	G	Q	A	V	A	V	R	A	K	A	F	G	F	S	V	I	F	Y	D	P	Y	L	Q	D	G	I	E	R	S	L	G	V	Q	R	V	Y	T	L	Q	D	L	L	Y	Q	S	D	C	V	S	L	H	C	N	L	N	E	H	N	H	H	L	I	N	D	F	T	I	K	Q	M	R	Q	G	A
Template Known Secondary structure					S											G	G	G	T								T	T	S		T	T					T	T					S	S									S										T	T		T	T	S	B						T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																									.																								.	.
Query SS confidence																																									.																								.	.
Query Sequence		Y	L	L	N	L	A	R	G	V	H	V	V	E	D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	.	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	P	.	.	A	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E
Query Conservation																																									.																								.	.
Alig confidence																																									.																								.	.
Template Conservation
Template Sequence		F	L	V	N	A	A	R	G	G	L	V	D	E	K	A	L	A	Q	A	L	K	E	G	R	I	R	G	A	A	L	D	V	H	E	S	E	P	F	S	F	A	Q	G	P	L	K	D	A	P	N	L	I	C	T	P	H	T	A	W	Y	S	E	Q	A	S	L	E	M	R	E	A	A	A	T	E	I	R	R	A	I
Template Known Secondary structure							S		G	G	G	B											T	T	S							S			S	S	S	S			T	T	S	S	T	T	T	T		S	S					S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		298	.	300	.				.	.	.	.	.	.	.	.	310
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		K	G	E	R	.	.	.	V	C	G	Q	V	D	R	A	R
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		T	G	R	I	P	E	S	L	R	N	C	V	N	K	E	F
Template Known Secondary structure			S		T	T	T	T		S	S	B				S
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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