Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 20 Aligned Residues 298 % Identity 22% Template c2nacA_ PDB info PDB header:oxidoreductase(aldehyde(d),nad+(a)) Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	.	.	.	.	S	A	D	Y	A	L	V	W	.	.	.	.	.	.	H	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I
Query Conservation																																		.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence																			.	.														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		L	G	S	V	S	G	E	L	G	L	R	K	Y	L	E	S	N	.	.	G	H	T	L	V	V	T	S	D	K	D	G	P	D	S	V	F	E	R	E	L	V	D	A	D	V	V	I	S	Q	P	F	W	P	A	Y	L	T	P	E	R	I	A	K	A	K	N	L	K	L	A	L	T	A	G	I	G	S	D	H	V
Template Known Secondary structure			S	B	T	T	T	G	G	G								T	.	.	T							S			S	S	T	T	S							T	T		S					B	T	T	B				B									T	T							S	S	S			T	T	B
Template Predicted Secondary structure																			.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	.	.	.	.	P	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A	G	V
Query Conservation																																																											.	.	.	.
Alig confidence																		.	.	.	.	.	.																																				.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		D	L	Q	S	A	I	D	R	N	V	T	V	A	E	V	T	.	.	.	.	.	.	Y	C	N	S	I	S	V	A	E	H	V	V	M	M	I	L	S	L	V	R	N	Y	L	P	S	H	E	W	A	R	K	G	G	W	N	I	A	D	C	V	S	H	A	Y	D	L	E	A	M	H	V	G	T	V	A	A	G	R
Template Known Secondary structure									T	T							T	.	.	.	.	.	.	T	T	T																	T	T										T	T									T	T					T	T									S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	.	.	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		I	G	L	A	V	L	R	R	L	A	P	F	D	V	H	L	H	Y	T	D	R	H	R	L	P	E	S	V	E	K	E	L	N	L	T	W	H	A	T	R	E	D	M	Y	P	V	C	D	V	V	T	L	N	C	P	L	H	P	E	T	E	H	M	I	N	D	E	T	L	K	L	F	K	R	G	A	Y	I	V	N
Template Known Secondary structure											G	G	G	T								S	S											T					S	S					G	G	G		S						S				T	T	T	T	T		B	S					T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		L	A	R	G	V	H	V	V	E	D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	P	A	.	.	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E	K	G	E	R	V
Query Conservation																																																													.	.
Alig confidence																																																													.	.
Template Conservation
Template Sequence		T	A	R	G	K	L	C	D	R	D	A	V	A	R	A	L	E	S	G	R	L	A	G	Y	A	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	T	M	P	Y	N	G	M	T	P	H	I	S	G	T	T	L	T	A	Q	A	R	Y	A	A	G	T	R	E	I	L	E	C	F	F	E	G	R	P	I
Template Known Secondary structure			S		G	G	G	B											T	T	S							S			S	S	S	S			T	T		G	G	G	T	S	T	T	B					S		T	T		S																					T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		303	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	Q	V	D	R	A	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	E	Y	L	I	V	Q	G
Template Known Secondary structure			G	G	G					T
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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