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Job DescriptionP75913
Confidence100.00%DateThu Jan 5 12:15:57 GMT 2012
Rank21Aligned Residues300
% Identity23%Templatec2j6iC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FYHPTFDTQWWIEALRKAIPQARVRAWKSGDND. . . . . . . . SADYALVW. . . . . . HPPVEMLAGRDLKAVFALGAGVDSI
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Template Sequence  LYGCTENKLGIANWLKDQ. . GHELITTSDKEGNSVLDQHIPDADIIITTPFHPAYITKERIDKAKKLKLVVVAGVGSDHI
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TTBTTTGGG
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Query Sequence  LSKLQAHPE. . MLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQP. . . . LPEYHREDFTIGILGA
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Template Sequence  DLDYINQTGKKISVLEVT. . . . . . GSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGA
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Query Sequence  GVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQS. . . FAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAY
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Template Sequence  GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAW
Template Known Secondary structure  SGGG

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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   222.......230.........240.........250.........260.........270. ........280.. .......290....
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Query Sequence  LLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVT. . . . . ITPHVAAITRP. . AEAVEYISRTIA
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Template Sequence  LVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILE
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   253......260.........270.........280.........290.........300.........310.........320.........330..
 
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Query Sequence  QLEKGE. . . RVCGQVDRARGY
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Template Sequence  SFFTGKFDYRPQDIILLNGEY
Template Known Secondary structure  TS




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   333......340.........350...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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