Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 21 Aligned Residues 300 % Identity 23% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																			.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	.	.	.	S	A	D	Y	A	L	V	W	.	.	.	.	.	.	H	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I
Query Conservation																																			.	.	.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence																				.	.														.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation																				.	.
Template Sequence		L	Y	G	C	T	E	N	K	L	G	I	A	N	W	L	K	D	Q	.	.	G	H	E	L	I	T	T	S	D	K	E	G	N	S	V	L	D	Q	H	I	P	D	A	D	I	I	I	T	T	P	F	H	P	A	Y	I	T	K	E	R	I	D	K	A	K	K	L	K	L	V	V	V	A	G	V	G	S	D	H	I
Template Known Secondary structure			T	T	B	T	T	T	G	G	G								T	.	.	T							S												G	G	G		S						T	T	S				B									T	T							S	S	S			T	T	B
Template Predicted Secondary structure																				.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure											.	.																																																		.	.	.	.
Query SS confidence											.	.																																																		.	.	.	.
Query Sequence		L	S	K	L	Q	A	H	P	E	.	.	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	.	.	.	.	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A
Query Conservation											.	.																																																		.	.	.	.
Alig confidence											.	.								.	.	.	.	.	.																																					.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		D	L	D	Y	I	N	Q	T	G	K	K	I	S	V	L	E	V	T	.	.	.	.	.	.	G	S	N	V	V	S	V	A	E	H	V	V	M	T	M	L	V	L	V	R	N	F	V	P	A	H	E	Q	I	I	N	H	D	W	E	V	A	A	I	A	K	D	A	Y	D	I	E	G	K	T	I	A	T	I	G	A
Template Known Secondary structure										T									T	.	.	.	.	.	.	T	S	S																	T	T										T	T									T	T				S	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		G	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	.	.	.	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		G	R	I	G	Y	R	V	L	E	R	L	V	P	F	N	P	K	E	L	L	Y	Y	D	Y	Q	A	L	P	K	D	A	E	E	K	V	G	A	R	R	V	E	N	I	E	E	L	V	A	Q	A	D	I	V	T	V	N	A	P	L	H	A	G	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	W
Template Known Secondary structure		S											G	G	G			S							S	S											T					S	S									S									S	T	T	T	T	T		B						T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.												.	.
Query SS confidence																																																				.	.	.	.	.												.	.
Query Sequence		L	L	N	L	A	R	G	V	H	V	V	E	D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	.	.	.	.	.	I	T	P	H	V	A	A	I	T	R	P	.	.	A	E	A	V	E	Y	I	S	R	T	I	A
Query Conservation																																																				.	.	.	.	.												.	.
Alig confidence																																																				.	.	.	.	.												.	.
Template Conservation
Template Sequence		L	V	N	T	A	R	G	A	I	C	V	A	E	D	V	A	A	A	L	E	S	G	Q	L	R	G	Y	G	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	D	M	R	N	K	Y	G	A	G	N	A	M	T	P	H	Y	S	G	T	T	L	D	A	Q	T	R	Y	A	Q	G	T	V	N	I	L	E
Template Known Secondary structure						S		G	G	G	B												T	S							S			S	S	S	S			T	T									T	T	S								S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		295	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		Q	L	E	K	G	E	.	.	.	R	V	C	G	Q	V	D	R	A	R	G	Y
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		S	F	F	T	G	K	F	D	Y	R	P	Q	D	I	I	L	L	N	G	E	Y
Template Known Secondary structure					T	S						G	G	G				B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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