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Job DescriptionP75913
Confidence100.00%DateThu Jan 5 12:15:57 GMT 2012
Rank3Aligned Residues301
% Identity24%Templatec2d0iC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDN. . . . . DSADYALVWH. . . . PPVEMLAGRDLKAVFALGAGVDSIL
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Template Sequence  MRPKVGVLLKMKREALEELKKY. ADVEIILYPSGEELKGVIGRFDGIIVSPTTKITREVLENAERLKVISCHSAGYDNID
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TTGGG
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TT
TT

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TTB
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   1........10.........20.. .......30.........40.........50.........60.........70.........
 
   72.......80.........90.........100.........110.........120........ .130.........140...
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Query Sequence  SKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQP. . . . . . . . LPEYHREDFTIGILG
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Template Sequence  LEEATKRGIYVTKVS. . . . . . GLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILG
Template Known Secondary structure  TT



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   80.........90.... .....100.........110.........120.........130.........140.........150...
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  AGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLL
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Template Sequence  MGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLE. GKYLV
Template Known Secondary structure 
SGGGT

TT






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TTTTTTB
TT.T
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   154.....160.........170.........180.........190.........200.........210.........220....... ..230..
 
   224.....230.........240.........250.........260.........270.........280.. .......290.........300.
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Query Sequence  NLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRP. . AEAVEYISRTIAQLEKGER
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Template Sequence  NIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEV
Template Known Secondary structure 
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GGGB
TT
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TTT

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   233......240.........250.........260.........270.........280.........290.........300.........310..
 
   302.......
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Query Sequence  VCGQVDRA
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Template Sequence  PEDLVNKE
Template Known Secondary structure 
TTBS
TT
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   313......320
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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