Job Description P75913 Confidence 99.93% Date Thu Jan 5 12:15:57 GMT 2012 Rank 47 Aligned Residues 240 % Identity 13% Template c2bruB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase subunit alpha; PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																				.	.	.																																																										.	.
Query SS confidence																				.	.	.																																																										.	.
Query Sequence		V	R	A	W	K	S	G	D	N	D	S	A	D	Y	A	L	V	W	.	.	.	H	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I	L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	.	.
Query Conservation																				.	.	.																																																										.	.
Alig confidence																				.	.	.																																										.	.	.	.	.	.											.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		A	E	I	V	E	G	N	S	V	W	Q	S	E	I	I	L	K	V	N	A	P	L	D	D	E	I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P	A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	.	.	.	.	.	.	S	V	P	R	I	S	R	A	Q	S	L	D
Template Known Secondary structure							S	G	G	G	G	S	S	S					S	S												S										T	T	T											T	T						S	S	.	.	.	.	.	.					S
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		1055	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.							.	.	.	1120	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.																																						.
Query SS confidence																																.	.	.																																						.
Query Sequence		A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	L	P	E	Y	.	.	.	H	R	E	D	F	T	I	G	I	L	G	A	G	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	.	K	S	W	P	G	V	Q	S	F
Query Conservation																																.	.	.																																						.
Alig confidence																																.	.	.																																						.
Template Conservation
Template Sequence		A	L	S	S	M	A	N	I	A	G	Y	R	A	I	V	E	A	A	H	E	F	G	R	F	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G
Template Known Secondary structure																							S	S		S	S			B		S	S		B										S	T	T	T													T								S	S	T									T	T
Template Predicted Secondary structure
Template SS confidence
		1129	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
		179	180	.	.	.															.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																								.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																								.	.
Query Sequence		A	G	R	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	.	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N	L	A	.	.	R	G	V	H	V	V	E	D	D	L	L	A	A	L	D
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																								.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																								.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	F	L	E	L	D	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q	N	G	G	N	C	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T																	S								B	T	T	B						B						T	T	S		S	S						S	T	T	T	T	T		S	B	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1209	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	.	P	A	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E
Query Conservation																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	T	V	P	G	E	I	F	T	T	E	N	G	V	K	V	I	G	Y	T	D	L	P	G	R	L	P	T	Q	S	S	Q	L	Y	G	T	N	L	V	N	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	S					S	S	S							T	T	T	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																1293	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions