Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 2 Aligned Residues 294 % Identity 27% Template c1ygyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: crystal structure of d-3-phosphoglycerate dehydrogenase from2 mycobacterium tuberculosis Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																						.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.										.	.	.	.
Query Sequence		D	I	I	F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	.	.	S	A	D	Y	A	L	V	W	H	.	.	.	.	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I
Query Conservation																																						.	.	.	.	.	.	.										.	.	.	.
Alig confidence														.	.								.	.	.													.	.	.	.	.	.	.										.	.	.	.
Template Conservation														.	.								.	.	.
Template Sequence		V	V	L	I	A	D	K	L	A	P	S	T	.	.	V	A	A	L	G	D	Q	.	.	.	V	E	V	R	W	V	D	G	P	D	R	D	K	L	L	A	A	V	P	E	A	D	A	L	L	V	R	S	A	T	T	V	D	A	E	V	L	A	A	A	P	K	L	K	I	V	A	R	A	G	V	G	L	D	N	V
Template Known Secondary structure							S	S			G	G	G	.	.	G	T	T	S		S	S	.	.	.	S							T	T	S								G	G	G		S						S	S	S		B							T		T	T							S	S	S			T	T	B
Template Predicted Secondary structure														.	.								.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	.	.	Q	P	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A	G	V	L	G
Query Conservation																																																										.	.
Alig confidence																		.	.	.	.	.	.																																			.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		D	V	D	A	A	T	A	R	G	V	L	V	V	N	A	P	.	.	.	.	.	.	T	S	N	I	H	S	A	A	E	H	A	L	A	L	L	L	A	A	S	R	Q	I	P	A	A	D	A	S	L	R	E	H	T	W	K	R	S	S	F	S	G	T	E	I	F	G	K	T	V	G	V	V	G	L	G	R	I	G
Template Known Secondary structure									T	T							T	.	.	.	.	.	.	T	S	S																	T	T										T	T				G	G	G							T	T									S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N	L	A	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	V	A	Q	R	I	A	A	F	G	A	Y	V	V	A	Y	D	P	Y	V	S	P	A	R	A	A	Q	L	G	I	E	L	L	S	L	D	D	L	L	A	R	A	D	F	I	S	V	H	L	P	K	T	P	E	T	A	G	L	I	D	K	E	A	L	A	K	T	K	P	G	V	I	I	V	N	A	A	R	G
Template Known Secondary structure										T	T	T								T	T	S									T														S									S	T	T	T	T	T		B						T	T	S		T	T							S		T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		V	H	V	V	E	D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	P	.	.	A	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E	K	G	E	R	V	C	G	Q	V
Query Conservation																																																								.	.
Alig confidence																															.																									.	.
Template Conservation																															.
Template Sequence		G	L	V	D	E	A	A	L	A	D	A	I	T	G	G	H	V	R	A	A	G	L	D	V	F	A	T	E	P	.	C	T	D	S	P	L	F	E	L	A	Q	V	V	V	T	P	H	L	G	A	S	T	A	E	A	Q	D	R	A	G	T	D	V	A	E	S	V	R	L	A	L	A	G	E	F	V	P	D	A	V
Template Known Secondary structure		T	S	B											T	S	S							S	S		S	S	S	S	.		S			G	G	G	G		T	T					S	S		S	S		S																				T	T				T	T	B
Template Predicted Secondary structure																															.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		307
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		314

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions