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Job DescriptionP75913
Confidence100.00%DateThu Jan 5 12:15:57 GMT 2012
Rank5Aligned Residues297
% Identity20%Templatec1ybaC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase; PDBTitle: the active form of phosphoglycerate dehydrogenase
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDND. . . . . . . SADYALVWH. . . . PPVEMLAGRDLKAVFALGAGVDS
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Template Sequence  IKFLLVEGV. . HQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQ
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Query Sequence  ILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQP. . LPEYHREDFTIGILGAGVL
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Template Sequence  VDLDAAAKRGIPVFNAP. . . . . . FSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYGHI
Template Known Secondary structure  B
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   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  GSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLAR
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Template Sequence  GTQLGILAESLGXYVYFYDIENKLPLG. . NATQVQHLSDLLNXSDVVSLHVPENPSTKNXXGAKEISLXKPGSLLINASR
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   163......170.........180......... 190.........200.........210.........220.........230.........240
 
   228.230.........240.........250........ .260.........270.........280.. .......290.........300.
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Query Sequence  GVHVVEDDLLAALDSGKVKGAMLDVFNREPL. . . . PPESPLWQHPRVTITPHVAAITRP. . AEAVEYISRTIAQLEKGER
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Template Sequence  GTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDPFTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGS
Template Known Secondary structure  TTSB
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GGGG
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   302.....
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Query Sequence  VCGQVD
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Template Sequence  TLSAVN
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   321.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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