Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 17 Aligned Residues 298 % Identity 21% Template c1xdwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans Resolution 1.98 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.												.	.	.	.										.	.
Query SS confidence																																							.	.	.	.	.	.	.												.	.	.	.										.	.
Query Sequence		M	D	I	I	F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	.	.	S	A	D	Y	A	L	V	W	H	P	P	.	.	.	.	V	E	M	L	A	G	R	D	L	.	.	K	A	V	F	A	L	G	A	G	V
Query Conservation																																							.	.	.	.	.	.	.												.	.	.	.										.	.
Alig confidence																																							.	.	.	.	.	.	.												.	.	.	.										.	.
Template Conservation
Template Sequence		M	K	V	L	C	Y	G	V	R	D	V	E	L	P	I	F	E	A	C	N	K	E	F	G	Y	D	I	K	C	V	P	D	Y	L	N	T	K	E	T	A	E	M	A	A	G	F	D	A	V	I	L	R	G	N	C	F	A	N	K	Q	N	L	D	I	Y	K	K	L	G	V	K	Y	I	L	T	R	T	A	G	T
Template Known Secondary structure								S			T	T	T								G	G	G	T								S			S		S						T	T	T	T		S						T	T			B												T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		D	S	I	L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	.	.	.	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A
Query Conservation																																																															.	.	.
Alig confidence																					.	.	.	.	.	.																																					.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		D	H	I	D	K	E	Y	A	K	E	L	G	F	P	M	A	F	V	P	.	.	.	.	.	.	R	Y	S	P	N	A	I	A	E	L	A	V	T	Q	A	M	M	L	L	R	H	T	A	Y	T	T	S	R	T	A	K	K	N	F	K	V	D	A	F	M	F	S	K	E	V	R	N	C	T	V	G	V	V	G	L
Template Known Secondary structure		T	T	B								T	T								.	.	.	.	.	.																				T	T									T	T	T						S	T	T					G	G	G	S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		G	R	I	G	R	V	A	A	Q	I	F	H	G	M	G	A	T	V	I	G	E	D	V	F	E	I	K	.	.	G	I	E	D	Y	C	T	Q	V	S	L	D	E	V	L	E	K	S	D	I	I	T	I	H	A	P	Y	I	K	E	N	G	A	V	V	T	R	D	F	L	K	K	M	K	D	G	A	I	L	V	N
Template Known Secondary structure		S													T	T								S	S				.	.	S		T	T	T														S										T	T	T			S	B							T	S		T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260															.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		L	A	R	G	V	H	V	V	E	D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	P	A	.	.	E	A	V	E	Y
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		C	A	R	G	Q	L	V	D	T	E	A	V	I	E	A	V	E	S	G	K	L	G	G	Y	G	C	D	V	L	D	G	E	A	S	V	F	G	K	D	L	E	G	Q	K	L	E	N	P	L	F	E	K	L	V	D	L	Y	P	R	V	L	I	T	P	H	L	G	S	Y	T	D	E	A	V	K	N	M	V	E	V
Template Known Secondary structure			S		G	G	G	B												T	S							S			T	T	G	G	G	T	T	T				T	T	S			S	S									T	T	T	T						S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	R	T	I	A	Q	L	E	K	G	E	R	V	C	G	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	Q	N	L	K	D	L	A	E	T	G	D	C	P	N	K	I
Template Known Secondary structure													S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions