Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 26 Aligned Residues 293 % Identity 21% Template c1qp8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase; PDBTitle: crystal structure of a putative formate dehydrogenase from2 pyrobaculum aerophilum Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		M	D	I	I	F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	S	A	D	Y	A	L	V	W	H	.	P	P	V	E	M	L	A	G	R	D	L	K	A	V	F	A	L	G	A	G	V	D	S	I	L	S	K	L	Q	A	H	P	E
Query Conservation																																																.
Alig confidence											.	.													.	.	.	.	.																			.																														.
Template Conservation											.	.													.	.	.	.	.																																																	.
Template Sequence		X	E	L	Y	V	N	F	E	L	.	.	P	P	E	A	E	E	E	L	R	K	Y	F	.	.	.	.	.	K	I	V	R	G	G	D	L	G	N	V	E	A	A	L	V	S	R	I	T	A	E	E	L	A	K	X	P	R	L	K	F	I	Q	V	V	T	A	G	L	D	H	L	P	W	E	S	I	.	P	P	H
Template Known Secondary structure								S			.	.										T	T		.	.	.	.	.					S	S			T	T	B					B	S											T	T						B	S	S	S			T	T	S			T	T	S	.		T	T
Template Predicted Secondary structure											.	.													.	.	.	.	.																																																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	.	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A	G	V	L	G	S	K	V	A	Q	S	L	Q	T	W
Query Conservation																																																			.
Alig confidence									.	.	.	.	.	.																																					.
Template Conservation									.	.	.	.	.	.
Template Sequence		V	T	V	A	G	N	A	.	.	.	.	.	.	G	S	N	A	D	A	V	A	E	F	A	L	A	L	L	L	A	P	Y	K	R	I	I	Q	Y	G	E	K	X	K	R	G	D	Y	G	R	D	V	E	I	P	L	I	Q	G	E	K	V	A	V	L	G	L	G	E	I	G	T	R	V	G	K	I	L	A	A	L
Template Known Secondary structure		S							.	.	.	.	.	.	S	S	S																	T	T										T	T						S						T	T							S		S	T												T
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N	L	A	R	G	V	H	V	V	E	D	D	L	L	A
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		G	A	Q	V	R	G	F	S	R	T	P	K	E	G	.	.	.	.	P	W	R	F	T	N	S	L	E	E	A	L	R	E	A	R	A	A	V	C	A	L	P	L	N	K	H	T	R	G	L	V	K	Y	Q	H	L	A	L	X	A	E	D	A	V	F	V	N	V	G	R	A	E	V	L	D	R	D	G	V	L	R
Template Known Secondary structure		T								S	S				S	.	.	.	.	S	S			B	S		S					T	T		S									S	T	T	T	T	T		B						T	T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																				.																							.	.					.	.
Query SS confidence																				.																							.	.					.	.
Query Sequence		A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	.	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	.	.	I	T	R	P	.	.	A	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E	K	G	E	R	V	C	G	Q	V	D	R	A	R	G	Y
Query Conservation																				.																							.	.					.	.
Alig confidence																				.																							.	.					.	.																												.
Template Conservation																																																																														.
Template Sequence		I	L	K	E	R	P	Q	F	I	F	A	S	D	V	W	W	G	R	N	D	F	A	K	D	A	E	F	F	S	L	P	N	V	V	A	T	P	W	V	A	G	G	Y	G	N	E	R	V	W	R	Q	X	V	X	E	A	V	R	N	L	I	T	Y	A	T	G	G	R	P	R	N	I	A	K	R	E	.	D	Y
Template Known Secondary structure							T	T						S			T	T	T	T			G	G	G					T	S	T	T						S		S	S	S	S	S																					T	T	S			S		B			G	G	.	G	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions