Job Description P75913 Confidence 96.97% Date Thu Jan 5 12:15:57 GMT 2012 Rank 325 Aligned Residues 135 % Identity 19% Template c1ortD_ PDB info PDB header:transferase Chain: D: PDB Molecule:ornithine transcarbamoylase; PDBTitle: ornithine transcarbamoylase from pseudomonas aeruginosa Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A	G	.	.	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F
Query Conservation																																																																	.	.
Alig confidence									.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation									.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	V	P	V	F	N	.	G	L	T	D	E	Y	H	P	T	Q	M	.	.	L	A	D	V	L	T	M	R	E	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	P	L	H	D	I	S	Y	A	Y	L	G	D	A	R	N	N	M	G	N	S	L	L	L	I	G	A	K	L	G	M
Template Known Secondary structure		S	S	S					.				S	S							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		G	G	G							S		S		S	T													T
Template Predicted Secondary structure									.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.																	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		161	.	.	.	.	.	.	.	.		170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.														.	.	210	.	.	.
Predicted Secondary structure											.							.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence											.							.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		P	L	R	C	W	S	R	T	R	.	K	S	W	P	G	V	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	Q	Q	L	L	.
Query Conservation											.							.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence											.							.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		D	V	R	I	A	A	P	K	A	L	W	P	H	D	E	F	V	A	Q	C	K	K	F	A	E	E	S	G	A	K	L	T	L	T	E	D	P	K	E	A	V	K	G	V	D	F	V	H	T	D	V	W	V	S	M	G	E	P	V	E	A	W	G	E	R	I	K	E	L	L	P	Y	Q	V	N	M	E	I	M	K
Template Known Secondary structure									G	G	G	S																T	T							S						T	T	T		S								S		T	T	S		S	S										G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		214	.	.	.	.	.	220	.	.	.	.	.	.																							.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	P	D	G	A	Y	L	L	N	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	V	H	V	V	E	D	D	L
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	G	N	P	R	A	K	F	M	H	C	L	P	A	F	H	N	S	E	T	K	V	G	K	Q	I	A	E	Q	Y	P	N	L	A	N	G	I	E	V	T	E	D	V	F
Template Known Secondary structure			S	S		T	T							S					S	S	S	S	S										T	T	S	S	S		S	S	B
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions