Job Description P75913 Confidence 99.63% Date Thu Jan 5 12:15:57 GMT 2012 Rank 60 Aligned Residues 231 % Identity 10% Template c1lehB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:leucine dehydrogenase; PDBTitle: leucine dehydrogenase from bacillus sphaericus Resolution 2.20 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	F	A	L	G	A	G	V	D	S	I	L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	L	P	E	Y	H	R	E	D	F
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	I	T	A	E	D	V	G	T	T	V	D	D	M	D	L	I	H	Q	E	T	D	Y	V	T	G	I	S	P	A	F	G	S	S	G	N	P	S	P	V	T	A	Y	G	V	Y	R	G	M	K	A	A	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	S	D	S	L	E	G	L
Template Known Secondary structure		S			B				T	T											T	T		S		B		S																														.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S				S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.															.	.	.	.	.	170	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																								.	.																.
Query SS confidence																																								.	.																.
Query Sequence		T	I	G	I	L	G	A	G	V	L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	.	.	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	.	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E
Query Conservation																																								.	.																.
Alig confidence																																								.	.																.								.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		A	V	S	V	Q	G	L	G	N	V	A	K	A	L	C	K	K	L	N	T	E	G	A	K	L	V	V	T	D	V	N	K	A	A	V	S	A	A	V	A	E	E	G	A	D	A	V	A	P	N	A	I	Y	G	V	T	C	D	I	F	A	P	C	.	.	.	.	.	A	L	G	A	V	L	N	D	F	T	I	P
Template Known Secondary structure									S												T	T	T								S													T						T	T	T	T	T	T	S			S						.	.	.	.	.	S		S			B	S	T	T
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.						.	.	240	.	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.												.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.												.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	D	G	A	Y	L	L	N	L	A	R	G	V	H	V	V	E	D	D	L	L	.	.	.	.	.	.	.	.	.	.	.	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	.	.	.	.	.	.	.	.	.	.	.	I
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	K	A	K	V	I	A	G	S	A	D	N	Q	L	K	D	P	R	H	G	K	Y	L	H	E	L	G	I	V	Y	A	P	D	Y	V	I	N	A	G	G	V	I	N	V	A	D	E	L	Y	G	Y	N	R	T	R	A	M	K	R	V	D	G	I	Y	D	S	I	E	K	I	F	A	I	S	K	R	D	G	V
Template Known Secondary structure						S					S		S	S		B	S												T										T	T									G	G	G																													T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	H	V	A	A	I	T	R	P	A	E	A	V	E	Y	I	S	R	T	I	A	Q	L	E	K	G	E	R	V	C	G	Q	V	D	R	A
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		P	S	Y	V	A	A	D	R	M	A	E	E	R	I	A	K	V	A	K	A	R	S	Q	F	L	Q	D	Q	.	.	R	N	I	L	N	G	R
Template Known Secondary structure																					T	T		S			T	T		.	.			T	T	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions