Job Description P75913 Confidence 100.00% Date Thu Jan 5 12:15:57 GMT 2012 Rank 7 Aligned Residues 299 % Identity 22% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.										.	.	.	.											.	.
Query SS confidence																																						.	.	.	.	.	.	.										.	.	.	.											.	.
Query Sequence		D	I	I	F	Y	H	P	T	F	D	T	Q	W	W	I	E	A	L	R	K	A	I	P	Q	A	R	V	R	A	W	K	S	G	D	N	D	.	.	.	.	.	.	.	S	A	D	Y	A	L	V	W	H	.	.	.	.	P	P	V	E	M	L	A	G	R	D	.	.	L	K	A	V	F	A	L	G	A	G	V	D
Query Conservation																																						.	.	.	.	.	.	.										.	.	.	.											.	.
Alig confidence																																						.	.	.	.	.	.	.										.	.	.	.											.	.
Template Conservation
Template Sequence		K	I	F	A	Y	A	I	R	E	D	E	K	P	F	L	K	E	W	E	D	A	H	K	D	V	E	V	E	Y	T	D	K	L	L	T	P	E	T	V	A	L	A	K	G	A	D	G	V	V	V	Y	Q	Q	L	D	Y	I	A	E	T	L	Q	A	L	A	D	N	G	I	T	K	M	S	L	R	N	V	G	V	D
Template Known Secondary structure							S			G	G	G										T		T	T	S						S	S				T	T	T	G	G	G	G	T	T		S							S	S		B											T	T							S	S	S			T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		S	I	L	S	K	L	Q	A	H	P	E	M	L	N	P	S	V	P	L	F	R	L	E	D	T	G	M	G	E	Q	M	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	R	I	Q	Q	N	S	S	H	W	Q	P	.	.	L	P	E	Y	H	R	E	D	F	T	I	G	I	L	G	A	G	V
Query Conservation																																																														.	.
Alig confidence																				.	.	.	.	.	.																																					.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		N	I	D	M	A	K	A	K	E	L	G	F	Q	I	T	N	V	P	.	.	.	.	.	.	V	Y	S	P	N	A	I	A	E	H	A	A	I	Q	A	A	R	I	L	R	Q	D	K	A	M	D	E	K	V	A	R	H	D	L	R	W	A	P	T	I	G	R	E	V	R	D	Q	V	V	G	V	V	G	T	G	H
Template Known Secondary structure		T	B								T	T								.	.	.	.	.	.		S																			T										T	T					T	T						G	G	G	S								S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	K	V	A	Q	S	L	Q	T	W	R	F	P	L	R	C	W	S	R	T	R	K	S	W	P	G	V	Q	S	F	A	G	R	E	E	L	S	A	F	L	S	Q	C	R	V	L	I	N	L	L	P	N	T	P	E	T	V	G	I	I	N	Q	Q	L	L	E	K	L	P	D	G	A	Y	L	L	N	L	A
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		I	G	Q	V	F	M	Q	I	M	E	G	F	G	A	K	V	I	T	Y	D	I	F	R	N	P	E	L	E	.	K	K	G	Y	Y	V	D	S	L	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	V	P	A	N	V	H	M	I	N	D	E	S	I	A	K	M	K	Q	D	V	V	I	V	N	V	S
Template Known Secondary structure													T	T								S	S							.		T	T		B		S										S						S				G	G	G	T	T		B	S							S		T	T							S
Template Predicted Secondary structure																														.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.														.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		R	G	V	H	V	V	E	D	D	L	L	A	A	L	D	S	G	K	V	K	G	A	M	L	D	V	F	N	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	P	P	E	S	P	L	W	Q	H	P	R	V	T	I	T	P	H	V	A	A	I	T	R	P	.	.	A	E	A	V	E	Y	I	S	R
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		R	G	P	L	V	D	T	D	A	V	I	R	G	L	D	S	G	K	I	F	G	Y	A	M	D	V	Y	E	G	E	V	G	I	F	N	E	D	W	E	G	K	E	F	P	D	A	R	L	A	D	L	I	A	R	P	N	V	L	V	T	P	K	T	A	F	Y	T	T	H	A	V	R	N	M	V	V	K	A	F	D
Template Known Secondary structure			G	G	G	B												T	S							S			T	T		T	T	T	T	T	S			T	T	S			S											T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	Q	L	E	K	G	E	R	V	C	G	Q	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	L	E	L	V	E	G	K	E	A	E	T	P	V	K
Template Known Secondary structure								T	T				S	S	B
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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