Return to main results Retrieve Phyre Job Id

Job DescriptionP75913
Confidence96.05%DateThu Jan 5 12:15:57 GMT 2012
Rank456Aligned Residues90
% Identity12%Templatec1gv1D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for thermophilic protein stability:2 structures of thermophilic and mesophilic malate3 dehydrogenases
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150......... 160.........170....... ..180.........190.........200.
Predicted Secondary structure 





..







.............












Query SS confidence 






















. .

















. . . . . . . . . . . . .























Query Sequence  FTIGILGAGVLGSKVAQSLQTWR. . FPLRCWSRTRKSWPGVQS. . . . . . . . . . . . . FAGREELSAFLSQCRVLINLLPNT
Query Conservation   





 
 

  

  
 


..  
    
          .............      
  

   


    


Alig confidence 






















..

















.............























Template Conservation 


 




 

   
  
       

 
 
       
   

            
    
   
 









  
Template Sequence  MKITVIGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITGSNDYADTADSDIVIITAGLL
Template Known Secondary structure 


STT

S
SSSSTTT


S
GGGSTT
S




Template Predicted Secondary structure 
























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   202.......210...... ...220......
Predicted Secondary structure 








...




Query SS confidence 














. . .









Query Sequence  PETVGIINQQLLEKL. . . PDGAYLLNLA
Query Conservation    
  

    
  
...
 

 



 
Alig confidence 














...









Template Conservation     
  
   
   
    
  





Template Sequence  LMKNAGIVKEVTDNIMKHSKNPIIIVVS
Template Known Secondary structure  TT
SS


Template Predicted Secondary structure 




Template SS confidence 



























   91........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions