Return to main results Retrieve Phyre Job Id

Job DescriptionP39376
Confidence96.70%DateThu Jan 5 12:00:08 GMT 2012
Rank94Aligned Residues75
% Identity13%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HNIETKWLYDFLTLEKC. . R. NFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQL
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Template Sequence  LELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKG. . . . LISRQKRIKLTEKAEPLIAEMEEVIHKT
Template Known Secondary structure  TT

S
SSTS
TT....S


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   28.30.........40.........50.........60.........70..... ....80.........90.........100...
 
   86.
Predicted Secondary structure 
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Query Sequence  ES
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Template Sequence  RG
Template Known Secondary structure 
Template Predicted Secondary structure 
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   112.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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