Job Description P39376 Confidence 55.69% Date Thu Jan 5 12:00:08 GMT 2012 Rank 289 Aligned Residues 164 % Identity 12% Template d1pb7a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.35

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.																														.	.	.
Query SS confidence																																				.	.																														.	.	.
Query Sequence		I	D	V	D	E	A	V	D	K	L	R	E	G	Q	S	D	C	I	F	S	F	H	D	E	D	L	L	E	A	P	F	D	H	I	.	.	R	L	F	E	S	Q	L	F	P	V	C	A	S	D	E	H	G	E	A	L	F	N	L	A	Q	P	H	F	P	.	.	.	L	L	N	Y	S	R	N	S	Y	M	G	R
Query Conservation																																				.	.																														.	.	.
Alig confidence																																				.	.																														.	.	.
Template Conservation
Template Sequence		K	E	W	N	G	M	M	G	E	L	L	S	G	Q	A	D	M	I	V	A	P	L	T	I	N	N	E	R	A	Q	Y	I	E	F	S	K	P	F	K	Y	Q	G	L	T	I	L	V	K	K	G	T	R	I	T	G	I	N	D	P	R	L	R	N	P	S	D	K	F	I	Y	A	T	V	K	Q	S	S	V	D	I
Template Known Secondary structure														T	S		S				S	S		B							T	T					S		S											T	T					S	T	T						S		B	T	T	B					B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	I	N	R	T	L	T	R	H	S	E	L	S	F	S	T	F	F	V	S	S	M	S	E	L	L	K	Q	V	A	L	D	G	C	G	I	A	W	L	P	E	Y	A	I	Q	Q	E	I	R	S	G	K	L	V	V	L	N	R	D	E	L	V	I	P	I	Q	A	.	Y	A	Y	R	M	N	T	R	M	N	P	V
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		Y	F	R	R	Q	V	E	L	S	T	M	Y	R	H	M	E	K	H	N	Y	E	S	A	A	E	A	I	Q	A	V	R	D	N	K	L	H	A	F	I	W	D	S	A	V	L	E	F	E	A	S	Q	K	C	D	L	V	T	T	G	E	L	F	F	R	S	G	F	G	I	G	M	R	K	D	S	P	W	K	Q	N
Template Known Secondary structure					T		G	G	G								T	T	T		B	S	S										T	T	S		S																	T	T					S	S		S											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		288	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	F	W	R	E	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	L	S	I	L	K	S	H	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions