Return to main results Retrieve Phyre Job Id

Job DescriptionP39376
Confidence93.30%DateThu Jan 5 12:00:08 GMT 2012
Rank157Aligned Residues48
% Identity17%Templated1fsea_
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50......
Predicted Secondary structure 










Query SS confidence 















































Query Sequence  HNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVE
Query Conservation    
 
  
  
 


  

 
 

  
 






  
  

  

  
Alig confidence 















































Template Conservation 
 

 

  

     
 
  


  
 

  

      
  

   
Template Sequence  PLLTKREREVFELLVQDKTTKEIASELFISEKTVRNHISNAMQKLGVK
Template Known Secondary structure 



TTT

TS
T
S
Template Predicted Secondary structure 













Template SS confidence 















































   10.........20.........30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions