Job Description P39376 Confidence 93.75% Date Thu Jan 5 12:00:08 GMT 2012 Rank 150 Aligned Residues 81 % Identity 12% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																				.	.	.							.	.	.
Query SS confidence																			.	.	.	.																																				.	.	.							.	.	.
Query Sequence		N	I	E	T	K	W	L	Y	D	F	L	T	L	E	K	C	R	.	.	.	.	N	F	S	Q	A	A	V	S	R	N	V	S	Q	P	A	F	S	R	R	I	R	A	L	E	Q	A	I	G	V	E	L	F	N	R	Q	.	.	.	V	T	P	L	Q	L	.	.	.	S	E	Q	G	K	I	F	H	S	Q	I	R
Query Conservation																			.	.	.	.																																				.	.	.							.	.	.
Alig confidence																			.	.	.	.																									.											.	.	.							.	.	.
Template Conservation																																															.
Template Sequence		N	L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	.	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I	Q
Template Known Secondary structure		T															S	T	T			B									T	T															.		T	T	S									T	T	S
Template Predicted Secondary structure																																															.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	L	Q	Q	L	E	S	N	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	V	Q	S	W	A	D	R	L	G	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions