Job Description P39376 Confidence 97.42% Date Thu Jan 5 12:00:08 GMT 2012 Rank 59 Aligned Residues 84 % Identity 11% Template c3nqoB_ PDB info PDB header:transcription Chain: B: PDB Molecule:marr-family transcriptional regulator; PDBTitle: crystal structure of a marr family transcriptional regulator (cd1569)2 from clostridium difficile 630 at 2.20 a resolution Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																																								.	.	.	.	.
Query SS confidence																							.	.	.	.																																								.	.	.	.	.
Query Sequence		G	A	I	L	H	N	I	E	T	K	W	L	Y	D	F	L	T	L	E	K	C	.	.	.	.	R	N	F	S	Q	A	A	V	S	R	N	V	S	Q	P	A	F	S	R	R	I	R	A	L	E	Q	A	I	G	V	E	L	F	N	R	Q	V	T	P	.	.	.	.	.	L	Q	L	S	E	Q	G	K	I	F	H
Query Conservation																							.	.	.	.																																								.	.	.	.	.
Alig confidence																							.	.	.	.																											.													.	.	.	.	.
Template Conservation																																																					.
Template Sequence		D	K	Y	F	G	I	L	T	S	R	Q	Y	X	T	I	L	S	I	L	H	L	P	E	E	E	T	T	L	N	N	I	A	R	K	X	G	T	S	K	Q	N	I	N	R	L	V	A	N	L	E	K	.	N	G	Y	V	D	V	I	P	S	P	H	D	K	R	A	I	N	V	K	V	T	D	L	G	K	K	V	X
Template Known Secondary structure							S	S													T	S		G	G	G											T	S															.	T	T	S							S	S		T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		76	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	I	R	H	L	L	Q	Q	L	E	S	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	C	S	R	T	G	I	N	F	X	A	D	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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