Job Description P39376 Confidence 46.35% Date Thu Jan 5 12:00:08 GMT 2012 Rank 319 Aligned Residues 179 % Identity 8% Template c3lr1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate- PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens Resolution 1.80 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																									.	.	.	.	.
Query SS confidence																																									.	.	.	.	.
Query Sequence		L	P	S	I	I	S	Q	M	P	P	L	F	T	W	A	I	E	A	I	D	V	D	E	A	V	D	K	L	R	E	G	Q	S	D	C	I	F	S	F	.	.	.	.	.	H	D	E	D	L	L	E	A	P	F	D	H	I	R	L	F	E	S	Q	L	F	P	V	C	A	S	D	E	H	G	E	A	L	F	N	L
Query Conservation																																									.	.	.	.	.
Alig confidence												.																													.	.	.	.	.
Template Conservation												.
Template Sequence		L	L	P	P	F	E	K	K	N	N	.	V	K	V	D	V	I	A	V	G	T	G	Q	A	L	K	L	G	E	A	G	D	V	D	V	V	F	V	H	A	R	K	L	E	D	K	F	V	A	D	G	F	G	V	N	R	K	D	V	X	Y	N	D	F	V	I	V	G	P	K	N	D	P	A	G	I	A	K	A	K
Template Known Secondary structure											T	.																			T	T	S		S																T	T	S																		T	T		T	T		G	G	G		S
Template Predicted Secondary structure												.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		191	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		A	Q	P	H	F	.	.	.	.	.	.	.	.	.	P	L	L	N	Y	S	R	N	S	Y	M	G	R	L	I	N	R	T	L	T	R	.	.	H	S	E	L	S	F	S	T	F	F	V	S	S	M	S	E	L	L	K	Q	V	A	L	D	G	C	G	I	A	W	L	P	E	Y	A	I	Q	Q	E	I	R	S	G
Query Conservation							.	.	.	.	.	.	.	.	.																						.	.
Alig confidence							.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		T	A	A	E	A	L	K	L	L	A	T	K	G	A	T	F	I	S	R	G	D	K	S	G	T	H	T	K	E	L	D	L	W	K	S	A	G	V	D	P	K	G	N	W	Y	V	E	A	G	Q	G	X	G	P	V	I	T	X	A	T	E	R	R	A	Y	T	L	T	D	R	G	T	Y	N	A	F	K	G	A	K
Template Known Secondary structure		S												T								S	S	S													T	T					S	S	S						S													T														B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		K	L	V	V	L	N	R	D	E	L	V	I	P	I	Q	A	Y	A	Y	R	.	.	.	M	N	T	R	M	N	P	V	A	E	R	F	W	R	E	L
Query Conservation																						.	.	.
Alig confidence																						.	.	.
Template Conservation
Template Sequence		T	D	L	V	I	L	F	Q	G	L	F	N	P	Y	G	I	X	A	V	N	P	K	K	F	P	H	V	K	Y	D	L	A	X	K	L	I	D	Y	V
Template Known Secondary structure		B																				T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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