Return to main results Retrieve Phyre Job Id

Job DescriptionP39376
Confidence97.05%DateThu Jan 5 12:00:08 GMT 2012
Rank84Aligned Residues79
% Identity11%Templatec3bj6B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of marr family transcription regulator sp03579
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30. ........40.........50.........60.. .......70.........80..
Predicted Secondary structure 




..






.....


Query SS confidence 





















. .






























. . . . .



















Query Sequence  NIETKWLYDFLTLEKCRNFSQA. . AVSRNVSQPAFSRRIRALEQAIGVELFNRQV. . . . . TPLQLSEQGKIFHSQIRHLL
Query Conservation   
 
  
  
 


  

 
 
..
  
 






  
  

  

  

 
  .....    

  
  
   
    
Alig confidence 





















..




















.








.....



















Template Conservation 


  
  

  
      
  


  
    



  
  
   .
 
 
     
 
   
 

  
           
Template Sequence  GVTVGQRAILEGLSLTPGATAPQLGAALQXKRQYISRILQEVQRA. GLIERRTNPEHARSHRYWLTPRGEAIITAIRADE
Template Known Secondary structure  T

STT
BT

T.TS

SSSTTS

Template Predicted Secondary structure 










.







Template SS confidence 















































































   34.....40.........50.........60.........70........ .80.........90.........100.........110..
 
   83......
Predicted Secondary structure 
Query SS confidence 






Query Sequence  QQLESNL
Query Conservation         
Alig confidence 






Template Conservation         
Template Sequence  XAKLALF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   113......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions