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Job DescriptionP39376
Confidence100.00%DateThu Jan 5 12:00:08 GMT 2012
Rank1Aligned Residues290
% Identity19%Templatec2esnC_
PDB info PDB header:structural genomics, unknown functionChain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: the crystal structure of probable transcriptional regulator pa04772 from pseudomonas aeruginosa
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  AILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQL
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Template Sequence  PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRAL
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   86...90.........100. ........110.........120... ......130.........140.........150.........160.
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Query Sequence  ESNLAELRGGSDYAQR. KIKIAAAHSLSLGLLPSIISQM. . . PPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLLE
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Template Sequence  GEGLEEWRPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSVEALASGRIDFALGYDRLP. . .
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   83......90.........100.........110.........120.........130.........140.........150.........
 
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Query Sequence  APFDHIRLFESQLFPVCASDEHGEALFNL. . AQPHFPLLNYSRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVAL
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Template Sequence  EGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSG. LRREVAVQLPTVLAALFLAG
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   164.....170.........180.........190.........200.........210.........220.. .......230.........240..
 
   240.........250.........260.........270.........280.........290.........300
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Query Sequence  DGCGIAWLPEYAIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI
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Template Sequence  STDFLLTAPRHAARALAEAAGLALYPAPFDIPPYVLRLYSHVQH. RDAHAWMIGQLKGLDI
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   243......250.........260.........270.........280...... ...290.........300..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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