Return to main results Retrieve Phyre Job Id

Job DescriptionP12758
Confidence100.00%DateThu Jan 5 11:33:11 GMT 2012
Rank14Aligned Residues213
% Identity27%Templatec3tl6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:purine nucleoside phosphorylase; PDBTitle: crystal structure of purine nucleoside phosphorylase from entamoeba2 histolytica
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30...... ...40.........50.........60.........70.........80... .
Predicted Secondary structure 










.











.
Query SS confidence 





























.














































.
Query Sequence  FHLGLTKNDLQGATLAIVPGDPDRVEKIAA. LMDKPVKLASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQ. L
Query Conservation   
      
      

  
 
 
   

 . 
                
   
  
 
   


   


    
  . 
Alig confidence 









..

















.














































.
Template Conservation   
     
 
..   

  


 
   

   
     
   
     

 
 
  
 
   


   


    

   
Template Sequence  PHNGAKYGEI. . AETVLMAGDPLRVKLLADTYLTDVVQYNSVRGAVGYTGYYKGVKLSVQAHGMGMPSIGIYAYELFNFY
Template Known Secondary structure  SS



TTSS..
SS


GGG

TT

SSS
Template Predicted Secondary structure 






..


















Template SS confidence 















































































   8.10....... ..20.........30.........40.........50.........60.........70.........80.....
 
   85....90.........100.........110.........120... ......130.........140.........150.........160...
Predicted Secondary structure 























.




















Query SS confidence 






































.







































Query Sequence  GIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHF. APLEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFY
Query Conservation 
   

  
 

 
      




    
  
      .     
   
  
   
   
         
   
 
 
 
Alig confidence 






































.







































Template Conservation 
   

  



 
     





       
                
  
   
             
   
 
 
 
Template Sequence  GVKRIIRIGSAGAFDESLKLGDIVIGMGACYDSNFERQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGNIYSANYFY
Template Known Secondary structure 



STT

TT
S

SSGGGT
SS




T


S
S
Template Predicted Secondary structure 









































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  PGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESHAVK
Query Conservation                             
   



 

    
   

    
  


                      
Alig confidence 



.................








































............





Template Conservation      .................      
   



 


  

   

    
  


 
  ............     
Template Sequence  DDHS. . . . . . . . . . . . . . . . . GAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISDLCYK. . . . . . . . . . . . FTQMME
Template Known Secondary structure 



.................TT

SST



............
Template Predicted Secondary structure 

.................













............
Template SS confidence 















































































   166... 170.........180.........190.........200.........210 ......
 
   244.....250
Predicted Secondary structure 
Query SS confidence 






Query Sequence  IVVEAAR
Query Conservation    
  
 
Alig confidence 






Template Conservation   
   
 
Template Sequence  VALSLAK
Template Known Secondary structure  TT

Template Predicted Secondary structure 

Template SS confidence 






   232......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions