Job Description P12758 Confidence 100.00% Date Thu Jan 5 11:33:11 GMT 2012 Rank 10 Aligned Residues 251 % Identity 27% Template c3eufC_ PDB info PDB header:transferase Chain: C: PDB Molecule:uridine phosphorylase 1; PDBTitle: crystal structure of bau-bound human uridine phosphorylase 1 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.							.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																								.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																								.	.	.	.	.	.	.
Query Sequence		M	S	K	S	D	V	F	H	L	G	L	T	K	N	D	L	.	.	.	.	.	.	Q	G	A	T	L	A	I	V	P	G	D	P	D	R	V	E	K	I	A	A	L	M	D	.	.	.	.	.	.	.	K	P	V	K	L	A	S	H	R	E	F	T	T	W	R	A	E	L	D	G	K	P	V	I	V	C	S	T
Query Conservation																		.	.	.	.	.	.																								.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	E	D	I	L	Y	H	F	N	L	T	T	S	R	H	N	F	P	A	L	F	G	D	V	K	F	V	C	V	G	G	S	P	S	R	M	K	A	F	I	R	C	V	G	A	E	L	G	L	D	C	P	G	R	D	Y	P	N	I	C	A	G	T	D	R	Y	A	M	Y	K	V	G	P	V	L	S	V	S	H
Template Known Secondary structure			S					G	G	G	T			T	T	T	S							T	T								S																T	T				T	T						T	T	T	T			S							T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																								.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																																								.	.	.	.	.
Query Sequence		G	I	G	G	P	S	T	S	I	A	V	E	E	L	A	Q	L	.	.	.	.	.	.	G	I	R	T	F	L	R	I	G	T	T	G	A	I	Q	P	H	I	N	V	G	D	V	L	V	T	T	A	S	V	R	L	D	G	A	S	L	H	F	.	.	.	.	.	A	P	L	E	F	P	A	V	A	D	F	E	C
Query Conservation																			.	.	.	.	.	.																																								.	.	.	.	.
Alig confidence																			.	.	.	.	.	.															.	.																								.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		G	M	G	I	P	S	I	S	I	M	L	H	E	L	I	K	L	L	Y	Y	A	R	C	S	N	V	T	I	I	R	I	G	T	S	G	G	I	.	.	G	L	E	P	G	T	V	V	I	T	E	Q	A	V	D	T	C	F	K	A	E	F	E	Q	I	V	L	G	K	R	V	I	R	K	T	D	L	N	K	K	L
Template Known Secondary structure			S	S																		T	T		B	S												S	.	.	S	S		T	T											T	T	S		S							T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure														.																																							.
Query SS confidence														.																																							.
Query Sequence		T	T	A	L	V	E	A	A	K	S	I	G	.	A	T	T	H	V	G	V	T	A	S	S	D	T	F	Y	P	G	Q	E	R	Y	D	T	Y	S	G	R	V	V	R	H	F	K	G	S	M	E	E	.	W	Q	A	M	G	V	M	N	Y	E	M	E	S	A	T	L	L	T	M	C	A	S	Q	G	L	R	A	G
Query Conservation														.																																							.
Alig confidence														.																																							.
Template Conservation
Template Sequence		V	Q	E	L	L	L	C	S	A	E	L	S	E	F	T	T	V	V	G	N	T	M	C	T	L	D	F	Y	E	G	Q	G	R	L	D	G	A	L	C	S	Y	T	E	K	D	K	Q	A	Y	L	E	A	A	Y	A	A	G	V	R	N	I	E	M	E	S	S	V	F	A	A	M	C	S	A	C	G	L	Q	A	A
Template Known Secondary structure														S	S											S		S	S	G	G	G	T		S		S	S				S															T	T						S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		M	V	A	G	V	I	V	N	R	T	Q	Q	E	I	P	.	.	N	A	E	T	M	K	Q	T	E	S	H	A	V	K	I	V	V	E	A	A	R	R	L	L
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		V	V	C	V	T	L	L	N	R	L	E	G	D	Q	I	S	S	P	R	N	V	L	S	E	Y	Q	Q	R	P	Q	R	L	V	S	Y	F	I	K	K	K	L
Template Known Secondary structure										G	G	G		S	S			S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions