Job Description P12758 Confidence 100.00% Date Thu Jan 5 11:33:11 GMT 2012 Rank 20 Aligned Residues 216 % Identity 18% Template c3bl6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:5'-methylthioadenosine nucleosidase/s- PDBTitle: crystal structure of staphylococcus aureus 5'-2 methylthioadenosine/s-adenosylhomocysteine nucleosidase in3 complex with formycin a Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		T	L	A	I	V	P	G	D	P	D	R	V	E	K	I	A	A	L	M	D	K	P	V	K	L	A	S	H	R	E	F	T	T	W	R	A	E	L	D	G	K	P	V	I	V	C	S	T	G	I	G	G	P	S	T	S	I	A	V	E	E	L	A	Q	.	L	G	I	R	T	F	L	R	I	G	T	T	G	A	I
Query Conservation																																																																		.
Alig confidence																											.																																							.
Template Conservation																											.
Template Sequence		M	I	G	I	I	G	A	M	E	E	E	V	T	I	L	K	N	K	L	T	Q	L	S	E	I	.	S	V	A	H	V	K	F	Y	T	G	I	L	K	D	R	E	V	V	I	T	Q	S	G	I	G	K	V	N	A	A	I	S	T	T	L	L	I	N	K	F	K	P	D	V	I	I	N	T	G	S	A	G	A	L
Template Known Secondary structure								S	S									T	T								.			T	T									T	T										S	S																		S						S
Template Predicted Secondary structure																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																						.	.														.	.	.	.	.
Query SS confidence																						.	.														.	.	.	.	.
Query Sequence		Q	P	H	I	N	V	G	D	V	L	V	T	T	A	S	V	R	L	D	G	.	.	A	S	L	H	F	A	P	L	E	F	P	A	V	.	.	.	.	.	A	D	F	E	C	T	T	A	L	V	E	A	A	K	S	I	G	A	T	T	H	V	G	V	T	A	S	S	D	T	F	Y	P	G	Q	E	R	Y	D	T
Query Conservation																						.	.														.	.	.	.	.
Alig confidence																						.	.														.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		D	E	S	L	N	V	G	D	V	L	I	S	D	D	V	K	Y	H	D	A	D	A	T	A	F	G	Y	E	Y	G	Q	I	P	Q	M	P	V	A	F	Q	S	S	K	P	L	I	E	K	V	S	Q	V	V	Q	Q	Q	Q	L	T	A	K	V	G	L	I	V	S	G	D	S	F	I	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	T	T			T	T											S	S				G	G	G	T			T	T			T	T	S		S	S																		T	T												S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		Y	S	G	R	V	V	R	H	F	K	G	S	M	E	E	W	Q	A	M	.	G	V	M	N	Y	E	M	E	S	A	T	L	L	T	M	C	A	S	Q	G	L	R	A	G	M	V	A	G	V	I	V	N	R	T	Q	Q	E	I	P	N	A	E	T	M	K	Q	T	E	S	H	A	V	K	I	V	V	E	A	A	R
Query Conservation																					.
Alig confidence		.	.	.	.	.	.														.																																					.	.	.
Template Conservation		.	.	.	.	.	.																																																			.	.	.
Template Sequence		.	.	.	.	.	.	G	S	V	E	Q	R	Q	K	I	K	K	A	F	P	N	A	M	A	V	E	M	E	A	T	A	I	A	Q	T	C	Y	Q	F	N	V	P	F	V	V	V	R	A	V	S	D	L	A	N	G	E	.	.	.	A	E	M	S	F	E	A	F	L	E	K	A	A	V	S	S	S	Q	T	V	E
Template Known Secondary structure		.	.	.	.	.	.		S												T	T						S	S												T													S	S	T	T	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																																			.	.	.
Template SS confidence
								152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		251	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		223	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions