Job Description P12758 Confidence 100.00% Date Thu Jan 5 11:33:11 GMT 2012 Rank 4 Aligned Residues 251 % Identity 28% Template c2xrfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridine phosphorylase 2; PDBTitle: crystal structure of human uridine phosphorylase 2 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																			.	.	.	.	.	.																																							.	.	.
Query SS confidence																			.	.	.	.	.	.																																							.	.	.
Query Sequence		M	S	K	S	D	V	F	H	L	G	L	T	K	N	D	L	Q	.	.	.	.	.	.	G	A	T	L	A	I	V	P	G	D	P	D	R	V	E	K	I	A	A	L	M	D	K	P	V	K	L	A	S	H	R	E	F	T	T	W	R	A	.	.	.	E	L	D	G	K	P	V	I	V	C	S	T	G	I	G	G
Query Conservation																			.	.	.	.	.	.																																							.	.	.
Alig confidence																			.	.	.	.	.	.																																							.	.	.
Template Conservation
Template Sequence		M	D	E	D	I	L	Y	H	L	D	L	G	T	K	T	H	N	L	P	A	M	F	G	D	V	K	F	V	C	V	G	G	S	P	N	R	M	K	A	F	A	L	F	M	H	K	E	L	G	F	E	D	I	K	D	I	C	A	G	T	D	R	Y	C	M	Y	K	T	G	P	V	L	A	I	S	H	G	M	G	I
Template Known Secondary structure			S					T	T	T	T			T	T	T	S							T	T								S																T	T							T	T	T	T		S	S							T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure															.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		P	S	T	S	I	A	V	E	E	L	A	Q	L	.	.	.	.	.	.	G	I	R	T	F	L	R	I	G	T	T	G	A	I	Q	P	H	I	N	V	G	D	V	L	V	T	T	A	S	V	R	L	D	G	A	S	L	H	F	A	.	.	.	.	.	P	L	E	F	P	A	V	A	D	F	E	C	T	T	A	L
Query Conservation															.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence															.	.	.	.	.	.																.	.																								.	.	.	.	.
Template Conservation																																				.	.
Template Sequence		P	S	I	S	I	M	L	H	E	L	I	K	L	L	H	H	A	R	C	C	D	V	T	I	I	R	I	G	T	S	G	G	I	G	.	.	I	A	P	G	T	V	V	I	T	D	I	A	V	D	S	F	F	K	P	R	F	E	Q	V	I	L	D	N	I	V	T	R	S	T	E	L	D	K	E	L	S	E	E	L
Template Known Secondary structure																		T	T		B	S												S	S	.	.	S		T	T											T	T	S		S							T	T								B
Template Predicted Secondary structure																																				.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		141	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																			.
Query SS confidence									.																																			.
Query Sequence		V	E	A	A	K	S	I	.	G	A	T	T	H	V	G	V	T	A	S	S	D	T	F	Y	P	G	Q	E	R	Y	D	T	Y	S	G	R	V	V	R	H	F	K	.	G	S	M	E	E	W	Q	A	M	G	V	M	N	Y	E	M	E	S	A	T	L	L	T	M	C	A	S	Q	G	L	R	A	G	M	V	A	G
Query Conservation									.																																			.
Alig confidence									.																																			.
Template Conservation
Template Sequence		F	N	C	S	K	E	I	P	N	F	P	T	L	V	G	H	T	M	C	T	Y	D	F	Y	E	G	Q	G	R	L	D	G	A	L	C	S	F	S	R	E	K	K	L	D	Y	L	K	R	A	F	K	A	G	V	R	N	I	E	M	E	S	T	V	F	A	A	M	C	G	L	C	G	L	K	A	A	V	V	C	V
Template Known Secondary structure						T	T	S	T	T												S		S	S	G	G	G	T		S	S	S	S				S															T	T						S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		V	I	V	N	R	T	Q	Q	E	.	.	I	P	N	A	E	T	M	K	Q	T	E	S	H	A	V	K	I	V	V	E	A	A	R	R	L	L
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		T	L	L	D	R	L	D	C	D	Q	I	N	L	P	H	D	V	L	V	E	Y	Q	Q	R	P	Q	L	L	I	S	N	F	I	R	R	R	L
Template Known Secondary structure						T	T	T		S	S													T														T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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